Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04311 and RBAM_026540

See DNA alignment / Visit BSNT_04311 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence pep-align/BSNT_04311___ezrA.1.9828.seq
#    -bsequence pep-align/RBAM_026540___ezrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04311___ezrA-RBAM_026540___ezrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04311___ezrA-RBAM_026540___ezrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04311___ezrA
# 2: RBAM_026540___ezrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 563
# Identity:     455/563 (80.8%)
# Similarity:   517/563 (91.8%)
# Gaps:           1/563 ( 0.2%)
# Score: 2347.0
# 
#
#=======================================

BSNT_04311___      1 MEFVIGLLIVLLALFAAGYFFRKKIYAEIDRLESWKIEILNRSIVEEMSK     50
                     ||.|||||::||||||||||||||||.|||||||||||||||||||||||
RBAM_026540__      1 MELVIGLLVILLALFAAGYFFRKKIYTEIDRLESWKIEILNRSIVEEMSK     50

BSNT_04311___     51 IKHLKMTGQTEEFFEKWREEWDEIVTAHMPKVEELLYDAEENADKYRFKK    100
                     ||||||||:||||||:||||||||||||:|||||||||||||||||||||
RBAM_026540__     51 IKHLKMTGETEEFFERWREEWDEIVTAHLPKVEELLYDAEENADKYRFKK    100

BSNT_04311___    101 ANQVLVHIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVRERYSKS    150
                     |||||||||||||||||:||.||||||||||||||||.|||||||||||:
RBAM_026540__    101 ANQVLVHIDDLLTAAESNIEGILREISDLVTSEEKSRGEIEQVRERYSKA    150

BSNT_04311___    151 RKNLLAYSHLYGELYDSLEKDLDEIWSGIKQFEEETEGGNYITARKVLLE    200
                     |||||||||||||||:|||.||||||||||:||||||.||||.|||||||
RBAM_026540__    151 RKNLLAYSHLYGELYNSLETDLDEIWSGIKEFEEETESGNYIKARKVLLE    200

BSNT_04311___    201 QDRNLERLQSYIDDVPKLLADCKQTVPGQIAKLKDGYGEMKEKGYKLEHI    250
                     |||.|::||:|||||||||||||||||.|||||||||.||.|||||||||
RBAM_026540__    201 QDRRLDQLQTYIDDVPKLLADCKQTVPNQIAKLKDGYREMTEKGYKLEHI    250

BSNT_04311___    251 QLDKELENLSNQLKRAEHVLMTELDIDEASAILQLIDENIQSVYQQLEGE    300
                     |::|||:.|:||:||||:.|:.|||:||||||||||||.|||:|:|||||
RBAM_026540__    251 QIEKELDTLTNQVKRAENALLEELDVDEASAILQLIDETIQSMYEQLEGE    300

BSNT_04311___    301 VEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVKESYRLTAGELGKQQ    350
                     ||||||||||||||||||:||:|||:.||.|||||||||:|||||:|:|.
RBAM_026540__    301 VEAGQSVLSKMPELIIAYEKLEEEKDRTKTETELVKESYQLTAGEIGRQH    350

BSNT_04311___    351 AFEKRLDEIGKLLSSVKDKLDAEHVAYSLLVEEVASIEKQIEEVKKEHAE    400
                     ||||:|:.||:||...::|||.||||||||:|||.:||||:||.:|||||
RBAM_026540__    351 AFEKQLETIGRLLEQAREKLDGEHVAYSLLIEEVEAIEKQLEEAQKEHAE    400

BSNT_04311___    401 YRENLQALRKEELQARETLSNLKKTISETARLLKTSNIPGIPSHIQEMLE    450
                     |||||||||||||||||||.:|:||||:|||:|:.||:||||..:::.||
RBAM_026540__    401 YRENLQALRKEELQARETLMHLRKTISDTARMLQKSNVPGIPEQVKDKLE    450

BSNT_04311___    451 NAHHHIQETVNQLNELPLNMEEAGAHLKQAEEIVNRASRESEELVEQVIL    500
                     .|:|||:|||:||.|||||||||..||.:||::|...|.|:|:||.||.|
RBAM_026540__    451 TANHHIEETVSQLEELPLNMEEAAKHLDEAEKVVEEVSEEAEDLVIQVKL    500

BSNT_04311___    501 IEKIIQFGNRFRSQNHILSEQLKEAERRFYAFDYDDSYEIAAAAVEKAAP    550
                     ||:|||:||||||||||||||||||||.|||:.|:::||:||.|||||||
RBAM_026540__    501 IERIIQYGNRFRSQNHILSEQLKEAERLFYAYSYNEAYEMAADAVEKAAP    550

BSNT_04311___    551 GAVEKIKADISA-    562
                     |||:|||||.|| 
RBAM_026540__    551 GAVKKIKADQSAS    563


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04311 and RBAM_026540

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
