Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04311 and RBAM_026540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04311___ezrA.1.9828.seq
# -bsequence dna-align/RBAM_026540___ezrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04311___ezrA-RBAM_026540___ezrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04311___ezrA-RBAM_026540___ezrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04311___ezrA
# 2: RBAM_026540___ezrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1734
# Identity: 1308/1734 (75.4%)
# Similarity: 1308/1734 (75.4%)
# Gaps: 87/1734 ( 5.0%)
# Score: 4817.5
#
#
#=======================================
BSNT_04311___ 1 ATGGAGTTTGTCATTGGATTATTAATTGTACTGCTTGCGCTGTTTGCGGC 50
||||||||.|||||.||||||||..||.|||||||.|||||.||||||||
RBAM_026540__ 1 ATGGAGTTAGTCATCGGATTATTGGTTATACTGCTCGCGCTCTTTGCGGC 50
BSNT_04311___ 51 AGGCTACTTTTTCAGGAAAAAAATCTACGCCGAAATCGACCGGCTGGAAT 100
.|||||||||||||||||||||||.||..|.|||||.|||||||||||||
RBAM_026540__ 51 GGGCTACTTTTTCAGGAAAAAAATTTATACGGAAATTGACCGGCTGGAAT 100
BSNT_04311___ 101 CGTGGAAGATTGAAATTCTGAATCGGTCGATCGTGGAAGAAATGTCTAAA 150
|.|||||||||||||||.|.||.||.|||||.||||||||||||||.||.
RBAM_026540__ 101 CATGGAAGATTGAAATTTTAAACCGTTCGATAGTGGAAGAAATGTCCAAG 150
BSNT_04311___ 151 ATAAAACATTTAAAAATGACGGGTCAGACAGAAGAGTTCTTTGAGAAG-T 199
||.||||||.|.||||||||.||..||||.|||||||||||||| ||| |
RBAM_026540__ 151 ATCAAACATCTGAAAATGACCGGAGAGACGGAAGAGTTCTTTGA-AAGAT 199
BSNT_04311___ 200 GGCGTGAAGAATGGGATGAGATTGTCACAGCCCACATGCCGAAAGTTGAA 249
||||.||.||.||||||||.||||||||||||||..||||||||||.|||
RBAM_026540__ 200 GGCGCGAGGAGTGGGATGAAATTGTCACAGCCCATCTGCCGAAAGTAGAA 249
BSNT_04311___ 250 GAGCTCCTTTATGATGCCGAGGAAAATGCAGACAAATACCGGTTTAAAAA 299
||||||||||||||||||||.||.||.||.||||||||||||||||||||
RBAM_026540__ 250 GAGCTCCTTTATGATGCCGAAGAGAACGCCGACAAATACCGGTTTAAAAA 299
BSNT_04311___ 300 GGCCAATCAAGTGCTCGTTCATATCGACGACCTGCTGACAGCGGCTGAAT 349
.||.|||||.|||||.||.||.|||||||||||.||.||.||.||.||||
RBAM_026540__ 300 AGCGAATCAGGTGCTTGTCCACATCGACGACCTCCTCACTGCAGCCGAAT 349
BSNT_04311___ 350 CAAGCATTGAAAAGATTCTTCGGGAAATCAGCGATCTTGTCACAAGTGAG 399
|||..||.|||...||.||.||.||.||||||||.|||||.||.||.|||
RBAM_026540__ 350 CAAATATAGAAGGCATACTGCGTGAGATCAGCGACCTTGTGACGAGCGAG 399
BSNT_04311___ 400 GAAAAGAGCCGTGAAGAGATTGAACAGGTGAGGGAGCGCTATTCGAAATC 449
|||||.|||||.|.||||||||||||||||.|.|||||.|||||.|||.|
RBAM_026540__ 400 GAAAAAAGCCGCGGAGAGATTGAACAGGTGCGTGAGCGGTATTCAAAAGC 449
BSNT_04311___ 450 TCGAAAAAACCTGCTGGCTTACAGCCACCTTTACGGGGAGCTTTATGACA 499
.||.||||||||.|||||.||||||||.||.|||||.|||||||||.|||
RBAM_026540__ 450 GCGGAAAAACCTTCTGGCGTACAGCCATCTCTACGGAGAGCTTTATAACA 499
BSNT_04311___ 500 GCCTTGAAAAGGATCTGGACGAAATTTGGAGCGGCATCAAACAATTTGAA 549
||||.||.|.||||||.||||||||.|||||||||||.|||.|.||.|||
RBAM_026540__ 500 GCCTGGAGACGGATCTCGACGAAATCTGGAGCGGCATAAAAGAGTTCGAA 549
BSNT_04311___ 550 GAAGAAACAGAAGGCGGAAACTATATTACTGCACGAAAAGTACTGCTTGA 599
|||||.||.|||.||||.||.||.||.|..||..|||||||.||||||||
RBAM_026540__ 550 GAAGAGACGGAAAGCGGCAATTACATCAAAGCGAGAAAAGTGCTGCTTGA 599
BSNT_04311___ 600 GCAGGACCGCAATCTTGAACGGCTTCAGTCATACATAGATGATGTGCCGA 649
.||||||||||..||.||.|.|||||||.|||||||||||||.||.||||
RBAM_026540__ 600 ACAGGACCGCAGACTGGATCAGCTTCAGACATACATAGATGACGTTCCGA 649
BSNT_04311___ 650 AGCTGTTAGCTGACTGTAAACAGACGGTGCCCGGA--CAGATTGCAAAGC 697
|.|||.|.||.||||||||||||||.||||| || ||.|||||.||||
RBAM_026540__ 650 AACTGCTCGCCGACTGTAAACAGACCGTGCC--GAACCAAATTGCCAAGC 697
BSNT_04311___ 698 TCAAGGATGGCTATGGCGAAATGAAAGAAAAAGGGTACAAGCTTGAGCAT 747
|.||.||.|||||..|.|||||||..||||||||.|||||..|.||||||
RBAM_026540__ 698 TGAAAGACGGCTACCGGGAAATGACGGAAAAAGGCTACAAATTGGAGCAT 747
BSNT_04311___ 748 ATCCAGCTTGATAAGGAATTAGAAAATCTGTCAAACCAGCTGAAACGAGC 797
||.||..|.||.||.||..|.||.|..||..||||.||..|||||||.||
RBAM_026540__ 748 ATTCAAATCGAAAAAGAGCTGGATACACTCACAAATCAAGTGAAACGGGC 797
BSNT_04311___ 798 GGAACATGTCCTGATGACT----GAGCTGGATATTGATGAAGCGTCCGCA 843
.|||.|.|..|| ||| ||..|||||.|.||.|||||||||||.
RBAM_026540__ 798 CGAAAACGCGCT----ACTAGAAGAATTGGATGTCGACGAAGCGTCCGCC 843
BSNT_04311___ 844 ATCCTGCAGCTCATTGACGAAAATATTCAATCTGTTTATCAGCAGCTGGA 893
|||||.|||||.|||||.||||..||||||||..|.|||.|.||||||||
RBAM_026540__ 844 ATCCTTCAGCTGATTGATGAAACCATTCAATCGATGTATGAACAGCTGGA 893
BSNT_04311___ 894 GGGCGAAGTTGAAGCCGGTCAATCCGTACTAAGCAAAATGCCTGAATTGA 943
.||||||||.||||||||.||.||||||.||||||||||||||||..|||
RBAM_026540__ 894 AGGCGAAGTGGAAGCCGGACAGTCCGTATTAAGCAAAATGCCTGAGCTGA 943
BSNT_04311___ 944 TTATTGCTTACGACAAGCTTAAAGAAGAGAAAGAGCATACGAAGGCGGAA 993
|.||.||.||.||.||||||.|.|||||.|||||.|..||.||..|.|||
RBAM_026540__ 944 TCATCGCGTATGAAAAGCTTGAGGAAGAAAAAGACCGCACAAAAACCGAA 993
BSNT_04311___ 994 ACTGAGCTGGTGAAGGAAAGCTA-CAGGCTGACAGCCGGTGAGCTCGGCA 1042
||.|||||.||.||||||||||| || ||||||.||.||.||..||||||
RBAM_026540__ 994 ACGGAGCTCGTCAAGGAAAGCTATCA-GCTGACGGCAGGAGAAATCGGCA 1042
BSNT_04311___ 1043 AACAGCAGGCTTTTGAAAAGCGCCTTGATGAA--ATTGGAAAGCTGCT-- 1088
.||||||.||.||.|||||.|..||.|| || ||.||...|||.||
RBAM_026540__ 1043 GACAGCATGCCTTCGAAAAACAGCTGGA--AACGATCGGCCGGCTCCTTG 1090
BSNT_04311___ 1089 ATCATCCGTTAAAGATAAGCTTGATGCAGAGCATGTCGCTTACTCACTTT 1138
|.||..|| |.|||.||||||||.|..|||||||||||||||||.||..
RBAM_026540__ 1091 AGCAGGCG--AGAGAAAAGCTTGACGGCGAGCATGTCGCTTACTCGCTGC 1138
BSNT_04311___ 1139 TAGTAGAAGAAGTTGCTTCAATAGAGAAGCAAATTGAAGAAGTGAAAAAA 1188
|..|.||||||||.|...|.||.||.|||||..|.|||||.|...|.|||
RBAM_026540__ 1139 TGATTGAAGAAGTCGAGGCCATCGAAAAGCAGCTGGAAGAGGCTCAGAAA 1188
BSNT_04311___ 1189 GAGCATGCCGAGTATCGTGAAAATCTGCAAGCGCTGAGAAAAGAAGAGCT 1238
||.||||||||.||.||||||||||||||.|||||.|||||||||||.||
RBAM_026540__ 1189 GAACATGCCGAATACCGTGAAAATCTGCAGGCGCTCAGAAAAGAAGAACT 1238
BSNT_04311___ 1239 TCAGGCGAGGGAGACGCTCA-GCAATTT--GAAAAAAACAATTTCTGAGA 1285
.||||||.||||.|||||.| |||..|| | |||||.||||||||.|
RBAM_026540__ 1239 GCAGGCGCGGGAAACGCTGATGCATCTTCGG---AAAACCATTTCTGACA 1285
BSNT_04311___ 1286 CAGCTAGACTGCTGAAGACTAGCAACATTCCAGGGATTCC-GAGCCATAT 1334
|.||..||.|||||.|.|..||||||.|.||.||.||||| ||.| .|.
RBAM_026540__ 1286 CGGCCCGAATGCTGCAAAAAAGCAACGTGCCGGGAATTCCTGAAC--AAG 1333
BSNT_04311___ 1335 TCAA-GAGATGCTGGAGAACGCGCATCATCATATTCAAGAAACAGTCAAT 1383
|||| ||.|.|||.||||..||..||||||||||..|||||||.||||..
RBAM_026540__ 1334 TCAAGGACAAGCTCGAGACGGCAAATCATCATATAGAAGAAACCGTCAGC 1383
BSNT_04311___ 1384 CAACTAAACGAACTTCCATTAAATATGGAAGAAGCCGGAGCC---CATTT 1430
|||.|..|.||.||.||..|.||.|||||.|||||| ||| |||.|
RBAM_026540__ 1384 CAATTGGAAGAGCTGCCGCTGAACATGGAGGAAGCC---GCCAAACATCT 1430
BSNT_04311___ 1431 GAAGCAAGCAGAA------------GAAATCGTCAAC--AG-GGCAAGCC 1465
|.|..||||.||| ||| ||||.| || |||
RBAM_026540__ 1431 GGATGAAGCCGAAAAGGTGGTTGAGGAA---GTCAGCGAAGAGGC----- 1472
BSNT_04311___ 1466 GGGAATCAGAGGAACTTGTCGA-GCAGGTCATCCTCATTGAAAAAATCAT 1514
|||| ||.||||| || .|||||.|..||.|||||....|||||
RBAM_026540__ 1473 -GGAA------GATCTTGT-GATTCAGGTGAAGCTGATTGAGCGGATCAT 1514
BSNT_04311___ 1515 TCAGTTCGGAAACCGGTTCAGAAGCCAGAATCATATTTTATCTGAACAGC 1564
.||.|.|||.|||||.|||.||||||||||||||||||||||.|||||||
RBAM_026540__ 1515 CCAATACGGCAACCGCTTCCGAAGCCAGAATCATATTTTATCCGAACAGC 1564
BSNT_04311___ 1565 TGAAAGAAGCGGAAAGACGTTTTTATGCTT-----TTGATTATGACGACT 1609
||||||||||||||.|.|..|||||||||| | ||.||||.|
RBAM_026540__ 1565 TGAAAGAAGCGGAACGGCTGTTTTATGCTTACAGCT--ATAATGAAG--- 1609
BSNT_04311___ 1610 CTTATGAAATTGCAGCTGCCGCTGTAGAAAAGGCTGCGCCAGGTGCAGTT 1659
|||||||.||.||.||.|..|||||.|||||.||.||.||.||.||.||.
RBAM_026540__ 1610 CTTATGAGATGGCGGCAGATGCTGTTGAAAAAGCAGCTCCCGGCGCCGTG 1659
BSNT_04311___ 1660 GAAAAAATCAAAGCAGA-CATATCCGCT---TAG 1689
.|||||||.|||||.|| || |||.||| |||
RBAM_026540__ 1660 AAAAAAATTAAAGCTGATCA-ATCTGCTTCATAG 1692
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.