Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04306 and RBAM_026500

See DNA alignment / Visit BSNT_04306 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence pep-align/BSNT_04306___sspA.1.9828.seq
#    -bsequence pep-align/RBAM_026500___sspA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04306___sspA-RBAM_026500___sspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04306___sspA-RBAM_026500___sspA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04306___sspA
# 2: RBAM_026500___sspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      59/73 (80.8%)
# Similarity:    62/73 (84.9%)
# Gaps:           4/73 ( 5.5%)
# Score: 281.0
# 
#
#=======================================

BSNT_04306___      1 -MANNNSGNSNNLLVPGAAQAIDQMKLEIASEFGVNLGADTTSRANGSVG     49
                      ...:||||||.||||||||||||||.|||||||||||.:||||||||||
RBAM_026500__      1 MSQQSNSGNSNQLLVPGAAQAIDQMKYEIASEFGVNLGPETTSRANGSVG     50

BSNT_04306___     50 GEITKRLVSFAQQNMGGG---QF     69
                     |||||||||||||:|||.   ||
RBAM_026500__     51 GEITKRLVSFAQQSMGGSSQQQF     73


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