Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04306 and RBAM_026500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence dna-align/BSNT_04306___sspA.1.9828.seq
# -bsequence dna-align/RBAM_026500___sspA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04306___sspA-RBAM_026500___sspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04306___sspA-RBAM_026500___sspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04306___sspA
# 2: RBAM_026500___sspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 182/222 (82.0%)
# Similarity: 182/222 (82.0%)
# Gaps: 12/222 ( 5.4%)
# Score: 763.5
#
#
#=======================================
BSNT_04306___ 1 ATGGC-TAACAAT--AACTCAGGTAACAGCAACAACCTTTTAGTACCAGG 47
|||.| .|||||| |||...||.|||||||||.|.||||||||.|||||
RBAM_026500__ 1 ATGTCACAACAATCAAACAGCGGAAACAGCAACCAGCTTTTAGTGCCAGG 50
BSNT_04306___ 48 AGCTGCTCAAGCGATCGACCAAATGAAATTAGAAATCGCTTCTGAATTCG 97
.|||||||||||.||||||||||||||.|..|||||||||||||||||||
RBAM_026500__ 51 CGCTGCTCAAGCTATCGACCAAATGAAGTATGAAATCGCTTCTGAATTCG 100
BSNT_04306___ 98 GTGTAAACCTTGGAGCAGACACAACTTCTCGCGCTAACGGTTCTGTTGGA 147
||||||||||||||.|.||.||||||||||||||.|||||||||||.||.
RBAM_026500__ 101 GTGTAAACCTTGGACCGGAAACAACTTCTCGCGCCAACGGTTCTGTCGGT 150
BSNT_04306___ 148 GGAGAGATCACAAAACGTCTTGTATCTTTTGCTCAACAAAACATGGGCGG 197
|||||.|||||||||||||||||.|||||||||||.||||.|||||||||
RBAM_026500__ 151 GGAGAAATCACAAAACGTCTTGTCTCTTTTGCTCAGCAAAGCATGGGCGG 200
BSNT_04306___ 198 AGG---------ACAATTCTAA 210
|.| .||.||.|||
RBAM_026500__ 201 AAGCAGCCAGCAGCAGTTTTAA 222
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