Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04302 and RBAM_026470

See DNA alignment / Visit BSNT_04302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence pep-align/BSNT_04302___ppnK.1.9828.seq
#    -bsequence pep-align/RBAM_026470___ppnK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04302___ppnK-RBAM_026470___ppnK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04302___ppnK-RBAM_026470___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04302___ppnK
# 2: RBAM_026470___ppnK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     227/276 (82.2%)
# Similarity:   242/276 (87.7%)
# Gaps:           9/276 ( 3.3%)
# Score: 1172.0
# 
#
#=======================================

BSNT_04302___      1 --------MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSD     42
                             |||.||||||||||:.||.||..||.||||.|||||..|..|
RBAM_026470__      1 MTAKGNGDMTDLRRNVYFFHKQNNETKEQVSSLKQLAESHGFTVAAQPED     50

BSNT_04302___     43 ANIIASIGGDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREK     92
                     |.||||||.||:||||||||.||||||||||.|||||||||||||||.||
RBAM_026470__     51 AGIIASIGSDGSFLQAVRKTGFRDDCLYVGIAKKGKAHLYCDFHSDEPEK    100

BSNT_04302___     93 MVDAMTFEQIEVRKYPLIEVTVDNASPFHCLNEVSIRSSIIKTFVMDVLI    142
                     |..:||.||:||||||||.||||.::.|||||||||||||||||||||||
RBAM_026470__    101 MAASMTAEQLEVRKYPLIHVTVDGSNHFHCLNEVSIRSSIIKTFVMDVLI    150

BSNT_04302___    143 DDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNN    192
                     ||||||||||||||||||||||||||||:|||||||:.||||||||||||
RBAM_026470__    151 DDLHFETFRGDGMIISTPTGSTAYNKSVSGAVVDPLISCMQVSELASLNN    200

BSNT_04302___    193 NTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIK    242
                     ||||||||.|:|||:|||||:||||||||||||||||||||||||.:||:
RBAM_026470__    201 NTYRTLGSSFILSSERKLTLQVVQDGNEHPIIGLDNEALSTRNVKKVEIR    250

BSNT_04302___    243 LSNKKIKTVKLKDNSFWEKVKRTFL-    267
                     ||:|||||||||||||||||||:|| 
RBAM_026470__    251 LSDKKIKTVKLKDNSFWEKVKRSFLS    276


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