Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04299 and RBAM_026460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:45
# Commandline: needle
# -asequence pep-align/BSNT_04299___sppA.1.9828.seq
# -bsequence pep-align/RBAM_026460___sppA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04299___sppA-RBAM_026460___sppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04299___sppA-RBAM_026460___sppA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04299___sppA
# 2: RBAM_026460___sppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 265/335 (79.1%)
# Similarity: 307/335 (91.6%)
# Gaps: 0/335 ( 0.0%)
# Score: 1377.0
#
#
#=======================================
BSNT_04299___ 1 MNAKRWIALVIALGIFGVSIIVSISMSFFESVKGAQTDLTSLTDESQEKT 50
|||||||||||||||||||:|.|:::...:::....:|..||||:::|.|
RBAM_026460__ 1 MNAKRWIALVIALGIFGVSVIASVTVGVLKNIGDTGSDFASLTDDTEEVT 50
BSNT_04299___ 51 LENGSLSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDK 100
|:.||..||||||||.|||:|||.|:.||.:.||:||:|||.:||||:||
RBAM_026460__ 51 LDKGSPGSKIAVLEVDGTIEDNGGSAGLLSSGGYDHRSFLKQVERAKEDK 100
BSNT_04299___ 101 TVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGY 150
:|||||||:|||||||||||||||||||:|||||||||||||||||||||
RBAM_026460__ 101 SVKGIVLKINSPGGGVYESAEIHKKLEELKKETKKPIYVSMGSMAASGGY 150
BSNT_04299___ 151 YISAAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHKD 200
|||.|||||:|:||||||||||||||||||||||:|||.|||||||||||
RBAM_026460__ 151 YISTAADKIYASPETLTGSLGVIMESVNYSKLADELGIKFETIKSGAHKD 200
BSNT_04299___ 201 IMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRSMSKAEVKKIADGRV 250
||||:|:|||||:.|||:||::||||||:||||||.||||:|||||||||
RBAM_026460__ 201 IMSPTRDMTKEERKIMQTMVNDSYEGFVNVISKGRHMSKADVKKIADGRV 250
BSNT_04299___ 251 YDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYEESFGLGSLF 300
||||||||:.|||:||||||||:|||||||::||||||:|||.|||||||
RBAM_026460__ 251 YDGRQAKKIGLVDDLGFYDDTISAMKKDHKNMKNASVITYEEGFGLGSLF 300
BSNT_04299___ 301 SMGANKMFKSEIDFLNMREILSQSGSPRMMYLYAK 335
||.|.||||||||||||:|::||||||||||||||
RBAM_026460__ 301 SMSAAKMFKSEIDFLNMKELISQSGSPRMMYLYAK 335
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