Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04294 and RBAM_026410

See DNA alignment / Visit BSNT_04294 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04294___ytxK.1.9828.seq
#    -bsequence pep-align/RBAM_026410___ytxK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04294___ytxK-RBAM_026410___ytxK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04294___ytxK-RBAM_026410___ytxK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04294___ytxK
# 2: RBAM_026410___ytxK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     248/329 (75.4%)
# Similarity:   284/329 (86.3%)
# Gaps:           1/329 ( 0.3%)
# Score: 1289.0
# 
#
#=======================================

BSNT_04294___      1 MQKDHVGAVYELLNEAAIMIKNELQISYIEALAEAGEMYFLEKTDQLKLP     50
                     ||.||||.:||||:|||.:|...|||||||.||||||||||||.|||.| 
RBAM_026410__      1 MQHDHVGQIYELLDEAAQVIAEGLQISYIEGLAEAGEMYFLEKADQLPL-     49

BSNT_04294___     51 ADQKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPD    100
                     .:::..:|.:||.||:|..:||||:|||||||:|||:||.||||||||||
RBAM_026410__     50 QEKQIGELNSLLAKADFRKWEHEWIRKAFQLAILKGLKDKSHPNRQMTPD     99

BSNT_04294___    101 TIGLFISYLVNKFMADKKELTILDPALGTGNLLFTVLNQLSEKTANSFGI    150
                     |||:|||||||||...:|.||:||||.||||||.|..||||:|.|.||||
RBAM_026410__    100 TIGIFISYLVNKFTGGRKGLTLLDPACGTGNLLLTAANQLSDKAAKSFGI    149

BSNT_04294___    151 EIDDVLLKIAYAQANLLKKELELFHQDSLEPLFIDPVDTVICDLPVGYYP    200
                     ||||||||||||||||.:||:|||.||||:||||:|.|.|||||||||||
RBAM_026410__    150 EIDDVLLKIAYAQANLQEKEMELFCQDSLQPLFIEPADAVICDLPVGYYP    199

BSNT_04294___    201 NDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMIPNHLFESSQ    250
                     ||||||||||||||||||||||||||||||||||||||||||||||:|:|
RBAM_026410__    200 NDEGAEAFELKADEGHSFAHHLFIEQSVKHTKPGGYLFFMIPNHLFDSAQ    249

BSNT_04294___    251 SGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGEYTKAPGQI    300
                     |.|||:||.:||:||||||||.::|||||.|||||:|||:||..|.|.|.
RBAM_026410__    250 SDKLKRFFAEKVYINALLQLPATMFKDEAQAKSILILQKKGEDAKPPKQA    299

BSNT_04294___    301 LLANLPSFSNQKAMLDMMAQFDEWFKKEK    329
                     ||||||||:||:||.:|.|:.|:|.:|||
RBAM_026410__    300 LLANLPSFANQQAMREMTAKLDQWIQKEK    328


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