Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04273 and RBAM_026310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence pep-align/BSNT_04273___ytqI.1.9828.seq
# -bsequence pep-align/RBAM_026310___ytqI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04273___ytqI-RBAM_026310___ytqI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04273___ytqI-RBAM_026310___ytqI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04273___ytqI
# 2: RBAM_026310___ytqI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity: 286/313 (91.4%)
# Similarity: 303/313 (96.8%)
# Gaps: 0/313 ( 0.0%)
# Score: 1516.0
#
#
#=======================================
BSNT_04273___ 1 MKTELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAV 50
||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026310__ 1 MKSELIRTISLYDTIILHRHVRPDPDAYGSQCGLTEILRETYPEKNIFAV 50
BSNT_04273___ 51 GTPEPSLSFLYSLDEVDNETYEGALVIVCDTANQERIDDQRYPSGAKLMK 100
|.|||||||||||||||:|||:.|||||||||||.|:|||||.|||||||
RBAM_026310__ 51 GQPEPSLSFLYSLDEVDDETYKDALVIVCDTANQGRVDDQRYHSGAKLMK 100
BSNT_04273___ 101 IDHHPNEDPYGDLLWVDTSASSVSEMIYELYLEGKEHGWKLNTKAAELIY 150
||||||||||||||||||:||||||||||||||||:||||||||||||||
RBAM_026310__ 101 IDHHPNEDPYGDLLWVDTNASSVSEMIYELYLEGKQHGWKLNTKAAELIY 150
BSNT_04273___ 151 AGIVGDTGRFLFPNTTEKTLKYAGELIQYPFSSSELFNQLYETKLNVVKL 200
||||||||||||||||:||||||||||::|||||||||||||||||||||
RBAM_026310__ 151 AGIVGDTGRFLFPNTTKKTLKYAGELIEFPFSSSELFNQLYETKLNVVKL 200
BSNT_04273___ 201 NGFIFQNVSLSENGAASVFIKKDTLEKFGTTASEASQLVGTLGNISGIRA 250
||||:|||||||||.||||||||.||.:||||||||||||||||||||||
RBAM_026310__ 201 NGFIYQNVSLSENGVASVFIKKDILETYGTTASEASQLVGTLGNISGIRA 250
BSNT_04273___ 251 WVFFVEEDDQIRVRFRSKGPVINGLARKYNGGGHPLASGASIYSWDEADR 300
||||||||||||||||||||||||:||||||||||||:||||:||||.|:
RBAM_026310__ 251 WVFFVEEDDQIRVRFRSKGPVINGIARKYNGGGHPLAAGASIFSWDETDQ 300
BSNT_04273___ 301 ILADLETLCKEHE 313
||||||.:|.||:
RBAM_026310__ 301 ILADLEEVCNEHK 313
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