Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04273 and RBAM_026310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_04273___ytqI.1.9828.seq
# -bsequence dna-align/RBAM_026310___ytqI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04273___ytqI-RBAM_026310___ytqI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04273___ytqI-RBAM_026310___ytqI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04273___ytqI
# 2: RBAM_026310___ytqI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 943
# Identity: 780/943 (82.7%)
# Similarity: 780/943 (82.7%)
# Gaps: 2/943 ( 0.2%)
# Score: 3236.0
#
#
#=======================================
BSNT_04273___ 1 ATGAAAACAGAATTGATCAGAACCATATCATTATATGACACGATTATCTT 50
||||||.|.|||.||||||||||||||||||||||||||||.||||||||
RBAM_026310__ 1 ATGAAATCCGAACTGATCAGAACCATATCATTATATGACACCATTATCTT 50
BSNT_04273___ 51 ACATAGACATGTGCGTCCTGATCCGGATGCCTACGGATCACAGTGCGGGC 100
|||||||||||||.|.|||||.|||||.||||||||.|||||||||||.|
RBAM_026310__ 51 ACATAGACATGTGAGGCCTGACCCGGACGCCTACGGTTCACAGTGCGGCC 100
BSNT_04273___ 101 TTACGGAAATCCTGCGTGAAACATATCCTGAAAAAAATATTTTTGCGGTC 150
||||||||||||||||.|||||.|||||.|||||||||||||||||.|||
RBAM_026310__ 101 TTACGGAAATCCTGCGGGAAACGTATCCCGAAAAAAATATTTTTGCCGTC 150
BSNT_04273___ 151 GGCAC-GCCTGAACCGTCCCTCTCTTTCTTATATTCCCTTGATGAGGTGG 199
|| || ||||||.||||||.|.|||||.|||||||||||.||||||||||
RBAM_026310__ 151 GG-ACAGCCTGAGCCGTCCTTGTCTTTTTTATATTCCCTCGATGAGGTGG 199
BSNT_04273___ 200 ACAATGAAACATATGAAGGCGCACTTGTCATTGTCTGCGATACGGCAAAT 249
|..|.|||||.|||.|||..||.||||||||.||.|||||.||.|||||.
RBAM_026310__ 200 ATGACGAAACCTATAAAGATGCTCTTGTCATCGTGTGCGACACCGCAAAC 249
BSNT_04273___ 250 CAGGAAAGAATCGACGATCAGCGTTATCCTTCAGGCGCCAAACTAATGAA 299
||.|..||..|||||||||||||.||.|.|||.|||||.||.||.|||||
RBAM_026310__ 250 CAAGGCAGGGTCGACGATCAGCGCTACCATTCCGGCGCAAAGCTCATGAA 299
BSNT_04273___ 300 AATCGACCACCATCCGAACGAAGATCCATACGGTGACCTTCTCTGGGTCG 349
|||.|||||||||||.||.||||||||.||.||.||.||..|.|||||||
RBAM_026310__ 300 AATAGACCACCATCCAAATGAAGATCCGTATGGCGATCTGTTATGGGTCG 349
BSNT_04273___ 350 ATACAAGCGCCAGCTCAGTAAGTGAAATGATTTACGAGCTGTATTTAGAA 399
||||.|..||.|||||.|||||.||||||||.||.||||||||..|.|||
RBAM_026310__ 350 ATACGAATGCAAGCTCCGTAAGCGAAATGATCTATGAGCTGTACCTGGAA 399
BSNT_04273___ 400 GGAAAAGAGCACGGCTGGAAGCTGAATACGAAAGCGGCAGAGCTGATCTA 449
|||||..|||||||||||||.||||||||||||||.||.|||||||||||
RBAM_026310__ 400 GGAAAGCAGCACGGCTGGAAACTGAATACGAAAGCAGCTGAGCTGATCTA 449
BSNT_04273___ 450 CGCCGGCATTGTTGGAGATACCGGACGCTTTTTATTTCCGAATACCACGG 499
|||.||.||.||.||.|||||.||.|||||.|||||.|||||.|||||..
RBAM_026310__ 450 CGCGGGTATCGTCGGTGATACGGGGCGCTTCTTATTCCCGAACACCACAA 499
BSNT_04273___ 500 AAAAAACATTAAAATATGCAGGCGAGCTCATTCAGTATCCATTCTCTTCC 549
||||.|||||||||||.||.||.|||||||||.|||..|||||.||.||.
RBAM_026310__ 500 AAAAGACATTAAAATACGCGGGAGAGCTCATTGAGTTCCCATTTTCATCG 549
BSNT_04273___ 550 TCAGAGTTATTTAATCAATTGTATGAAACAAAACTGAATGTGGTGAAGCT 599
||||||.|.||.|||||||||||||||||||||.|.||||||||||||||
RBAM_026310__ 550 TCAGAGCTGTTCAATCAATTGTATGAAACAAAATTAAATGTGGTGAAGCT 599
BSNT_04273___ 600 TAATGGCTTTATCTTTCAAAATGTGTCTTTGTCCGAAAACGGGGCGGCTT 649
|||.||||||||.|.||||||||||||..||||.||||||||.|..||||
RBAM_026310__ 600 TAACGGCTTTATTTATCAAAATGTGTCACTGTCTGAAAACGGCGTCGCTT 649
BSNT_04273___ 650 CTGTTTTCATCAAAAAGGATACGCTTGAAAAATTCGGCACAACGGCTTCT 699
|.||.|||||.|||||.||.|...|.||.|.||..||.||.||.||||||
RBAM_026310__ 650 CCGTGTTCATTAAAAAAGACATTTTGGAGACATATGGAACCACCGCTTCT 699
BSNT_04273___ 700 GAAGCGTCGCAGCTTGTCGGGACGCTCGGCAATATCTCAGGTATTCGCGC 749
||||||||||||||||||||.||.|||||.|||||.||.|||||.|||||
RBAM_026310__ 700 GAAGCGTCGCAGCTTGTCGGAACACTCGGAAATATTTCGGGTATCCGCGC 749
BSNT_04273___ 750 CTGGGTGTTTTTCGTAGAAGAAGACGATCAAATCAGAGTCAGATTCCGTT 799
.|||||||||||||||||||||||||||||||||||||||.|.|||||||
RBAM_026310__ 750 TTGGGTGTTTTTCGTAGAAGAAGACGATCAAATCAGAGTCCGGTTCCGTT 799
BSNT_04273___ 800 CGAAGGGGCCTGTCATTAACGGACTTGCCCGGAAATATAACGGCGGAGGG 849
|.||.||.||.|||||.||||||.|||||||||||||.||.|||||.||.
RBAM_026310__ 800 CAAAAGGTCCGGTCATCAACGGAATTGCCCGGAAATACAATGGCGGCGGA 849
BSNT_04273___ 850 CATCCGTTAGCTTCAGGCGCCTCTATTTACAGCTGGGATGAAGCTGATCG 899
||||||.|.||..|.|||||.||.||.|.|||||||||||||.|.||||.
RBAM_026310__ 850 CATCCGCTTGCGGCCGGCGCATCCATCTTCAGCTGGGATGAAACCGATCA 899
BSNT_04273___ 900 GATTTTAGCTGATCTGGAAACATTATGTAAAGAACACGAGTAG 942
||||.|.||||||||||||....|||||||.||||||.|||||
RBAM_026310__ 900 GATTCTTGCTGATCTGGAAGAGGTATGTAACGAACACAAGTAG 942
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