Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04271 and RBAM_026300

See DNA alignment / Visit BSNT_04271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_04271___ytrI.1.9828.seq
#    -bsequence pep-align/RBAM_026300___ytrI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04271___ytrI-RBAM_026300___ytrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04271___ytrI-RBAM_026300___ytrI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04271___ytrI
# 2: RBAM_026300___ytrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     132/167 (79.0%)
# Similarity:   157/167 (94.0%)
# Gaps:           0/167 ( 0.0%)
# Score: 727.0
# 
#
#=======================================

BSNT_04271___      1 MRVPQHYKKPGWQRFFAGMMCGAVISWFFFLFTYGTFQEEQVSLIEKQKE     50
                     ||:|::|||||||||||||||||::||.||||||||||||||:|||||:|
RBAM_026300__      1 MRIPEYYKKPGWQRFFAGMMCGAIVSWLFFLFTYGTFQEEQVTLIEKQRE     50

BSNT_04271___     51 HVKDLNNQISIYQEDLHKLNEDNKRKLLIQSVSVKLLNGDKYKISQPDKT    100
                     |.:||.|||||||:||||||||||::||||||.|||:||:||:|:||||.
RBAM_026300__     51 HARDLKNQISIYQKDLHKLNEDNKQRLLIQSVDVKLINGEKYRIAQPDKM    100

BSNT_04271___    101 KFEEHVKDDISEVITKDIESVYQTKDLLKRTIENKVYMINEKKYEATVRE    150
                     ||||.|||:|||||||||||||:||:|||||||||:|.||||:::|.|:|
RBAM_026300__    101 KFEEQVKDNISEVITKDIESVYKTKELLKRTIENKIYTINEKEFKAEVKE    150

BSNT_04271___    151 LIIYTRLTVELEISFAT    167
                     |.|||||:||:.|||||
RBAM_026300__    151 LTIYTRLSVEIHISFAT    167


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