Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04271 and RBAM_026300

See Amino acid alignment / Visit BSNT_04271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence dna-align/BSNT_04271___ytrI.1.9828.seq
#    -bsequence dna-align/RBAM_026300___ytrI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04271___ytrI-RBAM_026300___ytrI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04271___ytrI-RBAM_026300___ytrI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04271___ytrI
# 2: RBAM_026300___ytrI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 506
# Identity:     371/506 (73.3%)
# Similarity:   371/506 (73.3%)
# Gaps:           4/506 ( 0.8%)
# Score: 1310.0
# 
#
#=======================================

BSNT_04271___      1 ATGAGGGTCCCCCAACATTACAAAAAACCGGGATGGCAGCGTTTTTTCGC     50
                     |||||..|.|||.|..||||.|||||||||||||||||||||||||||||
RBAM_026300__      1 ATGAGAATTCCCGAGTATTATAAAAAACCGGGATGGCAGCGTTTTTTCGC     50

BSNT_04271___     51 GGGAATGATGTGCGGGGCCGTAATCAGCTGGTTCTTTTTCCTGTTTACCT    100
                     |||||||||||||||.|||.|..||||||||.|.||.||.||||||||.|
RBAM_026300__     51 GGGAATGATGTGCGGAGCCATCGTCAGCTGGCTGTTCTTTCTGTTTACAT    100

BSNT_04271___    101 ACGGAACATTCCAAGAGGAGCAGGTCAGCCTCATCGAAAAGCAAAAAGAG    150
                     |||||||.||.||.||.||.||.||.|...|.||.||||||||....|||
RBAM_026300__    101 ACGGAACGTTTCAGGAAGAACAAGTGACGTTAATTGAAAAGCAGCGTGAG    150

BSNT_04271___    151 CATGTAAAAGACTTGAACAATCAAATTTCGATCTATCAGGAAGACCTCCA    200
                     ||.|.....||.||.||.||.|||||.||.|||||||||.|.||.||.||
RBAM_026300__    151 CACGCGCGGGATTTAAAAAACCAAATCTCCATCTATCAGAAGGATCTTCA    200

BSNT_04271___    201 TAAACTGAATGAAGATAATAAAAGAAAACTGCTGATTCAAAGCGTCAGCG    250
                     ||||.|.|||||.||||||||...||.|||.||.||.|||||.||....|
RBAM_026300__    201 TAAATTAAATGAGGATAATAAGCAAAGACTTCTCATCCAAAGTGTTGATG    250

BSNT_04271___    251 TCAAATTGCTGAATGGAGATAAATATAAAATATCACAGCCGGATAAAACG    300
                     |.||..||.|.|||||.||.|||||.|.|||..|.|||||.||.||.|.|
RBAM_026300__    251 TGAAGCTGATCAATGGGGAAAAATACAGAATCGCCCAGCCTGACAAGATG    300

BSNT_04271___    301 AAATTCGAGGAGCATGTAAAGGATGATATTTCAGAGGTGATTACAAAAGA    350
                     |||||.|||||.||.||.||||||.|||||||.||.||.||.||||||||
RBAM_026300__    301 AAATTTGAGGAACAAGTGAAGGATAATATTTCGGAAGTCATCACAAAAGA    350

BSNT_04271___    351 CATAGAGAGCGTCTATCAAACAAAGGATCTCTTGAAGCGGACAATTGAAA    400
                     .||.||.|||||.|||.||||||||||.||.||.||.|||||.||.||||
RBAM_026300__    351 TATTGAAAGCGTGTATAAAACAAAGGAGCTTTTAAAACGGACGATCGAAA    400

BSNT_04271___    401 ATAAAGTCTATATGATCAATGAAAAAAAATACGAGGC--AACCGTCAGAG    448
                     |.|||.|.||.|..||.|||||.||..|||...|.||  ||  ||.|..|
RBAM_026300__    401 ACAAAATATACACCATAAATGAGAAGGAATTTAAAGCTGAA--GTAAAGG    448

BSNT_04271___    449 AATTGATTATTTATACGAGGCTGACAGTGGAACTTGAAATATCTTTCGCC    498
                     ||.|||..|||||||||||..||.|.||.|||.||.|.||.|||||.||.
RBAM_026300__    449 AACTGACGATTTATACGAGATTGTCTGTCGAAATTCATATTTCTTTTGCA    498

BSNT_04271___    499 ACATAA    504
                     ||.|||
RBAM_026300__    499 ACGTAA    504


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