Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04270 and RBAM_026290

See DNA alignment / Visit BSNT_04270 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:43
# Commandline: needle
#    -asequence pep-align/BSNT_04270.1.9828.seq
#    -bsequence pep-align/RBAM_026290.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04270-RBAM_026290.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04270-RBAM_026290.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04270
# 2: RBAM_026290
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     104/113 (92.0%)
# Similarity:   111/113 (98.2%)
# Gaps:           0/113 ( 0.0%)
# Score: 539.0
# 
#
#=======================================

BSNT_04270         1 MDQEAGFMVNFINSYFIALGVLIGGALIGGLGAYLAGEPPLTAITKLANR     50
                     ||||||||.|||:|||||||||:||||||||||||:||||||||||||||
RBAM_026290        1 MDQEAGFMANFISSYFIALGVLLGGALIGGLGAYLSGEPPLTAITKLANR     50

BSNT_04270        51 LKIWALVAAIGGTFDAVYSFERGILEGNTRDIFKQLLLIISAMGGAQSGW    100
                     |||||||||||||||||||||||:.||||||||||||||||||||||:||
RBAM_026290       51 LKIWALVAAIGGTFDAVYSFERGLFEGNTRDIFKQLLLIISAMGGAQTGW    100

BSNT_04270       101 LIISWLTQEHLSS    113
                     |||||||||::||
RBAM_026290      101 LIISWLTQENMSS    113


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