Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04270 and RBAM_026290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_04270.1.9828.seq
# -bsequence dna-align/RBAM_026290.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04270-RBAM_026290.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04270-RBAM_026290.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04270
# 2: RBAM_026290
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity: 275/342 (80.4%)
# Similarity: 275/342 (80.4%)
# Gaps: 0/342 ( 0.0%)
# Score: 1107.0
#
#
#=======================================
BSNT_04270 1 ATGGATCAGGAAGCAGGATTTATGGTGAATTTTATCAATAGCTACTTCAT 50
||||||||||||||.||||||||||.||||||.||||..||.||.||.||
RBAM_026290 1 ATGGATCAGGAAGCCGGATTTATGGCGAATTTCATCAGCAGTTATTTTAT 50
BSNT_04270 51 TGCGTTAGGGGTGCTGATCGGGGGCGCACTCATCGGAGGGCTCGGAGCAT 100
.||..|.||.|||.||.||||.|||||.||.|||||.||.||||||||.|
RBAM_026290 51 CGCCCTCGGTGTGTTGCTCGGCGGCGCGCTGATCGGCGGCCTCGGAGCTT 100
BSNT_04270 101 ATTTGGCAGGCGAACCCCCGCTTACAGCCATTACAAAGCTTGCCAACCGG 150
||||..|||||||.||.|||||.||.||.||.|||||..|.||.|||.||
RBAM_026290 101 ATTTATCAGGCGAGCCTCCGCTGACGGCGATCACAAAATTGGCGAACAGG 150
BSNT_04270 151 TTAAAAATATGGGCGCTTGTCGCAGCTATCGGAGGCACCTTTGATGCGGT 200
.|.||.||.||||||||||||||.||.|||||.||.||.|||||||||||
RBAM_026290 151 CTGAAGATCTGGGCGCTTGTCGCGGCCATCGGGGGAACATTTGATGCGGT 200
BSNT_04270 201 ATACAGCTTTGAACGCGGCATACTCGAAGGCAATACGAGAGATATCTTTA 250
||||||.||.||.||.||..|..||||||||||.|||.|.||.|||||.|
RBAM_026290 201 ATACAGTTTCGAGCGGGGGCTGTTCGAAGGCAACACGCGCGACATCTTCA 250
BSNT_04270 251 AACAGCTTCTTTTAATTATTTCGGCCATGGGGGGCGCGCAAAGCGGCTGG 300
||||||||||||||||||||||.||.|||||.||||||||.|.|||||||
RBAM_026290 251 AACAGCTTCTTTTAATTATTTCAGCAATGGGCGGCGCGCAGACCGGCTGG 300
BSNT_04270 301 CTTATTATATCATGGCTGACCCAGGAGCATCTTTCTTCATGA 342
||.|||||.||||||||||||||||||.||.|.||.||||||
RBAM_026290 301 CTGATTATTTCATGGCTGACCCAGGAGAATATGTCATCATGA 342
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