Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04267 and RBAM_026260
See
DNA alignment /
Visit
BSNT_04267 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_04267___accD.1.9828.seq
# -bsequence pep-align/RBAM_026260___accD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04267___accD-RBAM_026260___accD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04267___accD-RBAM_026260___accD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04267___accD
# 2: RBAM_026260___accD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity: 267/290 (92.1%)
# Similarity: 278/290 (95.9%)
# Gaps: 0/290 ( 0.0%)
# Score: 1380.0
#
#
#=======================================
BSNT_04267___ 1 MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNMRV 50
|||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_026260__ 1 MLKDIFTKKKKYASVPSEQAKHDVPEGIMTKCPKCKKIMLTKELDKNLRV 50
BSNT_04267___ 51 CMNCDYHFPMNAKQRIESLMDEKSFEEFNQGMLSENPLGFPGYLEKLEKD 100
||||.:|||||||||||||:||.|||||||||:||||||||.||||:|||
RBAM_026260__ 51 CMNCGHHFPMNAKQRIESLLDEDSFEEFNQGMISENPLGFPEYLEKIEKD 100
BSNT_04267___ 101 REKTSLNEAVVTGKGTIGGHPAVVAVMDSSFRMGSMGSVVGEKITLAIEK 150
|||||||||||||||||.|.|||:|:|||:||||||||||||||||||||
RBAM_026260__ 101 REKTSLNEAVVTGKGTISGFPAVIAIMDSTFRMGSMGSVVGEKITLAIEK 150
BSNT_04267___ 151 AKADKVPFIIFTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVM 200
||.:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026260__ 151 AKEEKVPFIIFTASGGARMQEGVLSLMQMAKTSSALKLFSEEQGLIISVM 200
BSNT_04267___ 201 THPTTGGVSASFASLGDYNFAEPGALIGFAGRRIIEQTIGEKLPEDFQTA 250
||||||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_026260__ 201 THPTTGGVSASFASLGDYNFAEPGTLIGFAGRRIIEQTIGEKLPEDFQTA 250
BSNT_04267___ 251 EFLLKHGQLDAVIHRDDMKKTLENLLDMHQTGGDIEWLQD 290
|||||||||||||||:|||..|..|||||||||:.|||||
RBAM_026260__ 251 EFLLKHGQLDAVIHRNDMKDKLAFLLDMHQTGGEYEWLQD 290
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.