Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04264 and RBAM_026240
See
DNA alignment /
Visit
BSNT_04264 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_04264___pfkA.1.9828.seq
# -bsequence pep-align/RBAM_026240___pfkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04264___pfkA
# 2: RBAM_026240___pfkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 311/319 (97.5%)
# Similarity: 316/319 (99.1%)
# Gaps: 0/319 ( 0.0%)
# Score: 1600.0
#
#
#=======================================
BSNT_04264___ 1 MKRIGVLTSGGDSPGMNAAVRAVVRKAIYHDVEVYGIYNGYAGLISGKIE 50
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_026240__ 1 MKRIGVLTSGGDSPGMNAAVRAVVRKAIYHDVEVYGIYNGYSGLISGKIE 50
BSNT_04264___ 51 KLELGSVGDIIHRGGTKLYTARCPEFKTVEGREKGIENLKKLGIEGLVVI 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026240__ 51 KLELGSVGDIIHRGGTKLYTARCPEFKTVEGREKGIENLKKLGIEGLVVI 100
BSNT_04264___ 101 GGDGSYMGAKKLTEHGFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAI 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026240__ 101 GGDGSYMGAKKLTEHGFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAI 150
BSNT_04264___ 151 DKIRDTATSHERTYVIEVMGRHAGDIALWAGLAGGAESILIPEADYDMHE 200
||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_026240__ 151 DKIRDTATSHERTYVIEVMGRHAGDIALWAGLAGGAESILIPEADYDMQE 200
BSNT_04264___ 201 IIARLKRGHERGKKHSIIIVAEGVGSGVEFGKRIEEETNLETRVSVLGHI 250
||.||||||:||||||||||||||||||||||||||||||||||||||||
RBAM_026240__ 201 IIGRLKRGHDRGKKHSIIIVAEGVGSGVEFGKRIEEETNLETRVSVLGHI 250
BSNT_04264___ 251 QRGGSPSAADRVLASRLGAYAVELLLEGKGGRCVGIQNNKLVDHDIIEIL 300
||||||||:|||||||||||||||||:|||||||||||||||||||||||
RBAM_026240__ 251 QRGGSPSASDRVLASRLGAYAVELLLKGKGGRCVGIQNNKLVDHDIIEIL 300
BSNT_04264___ 301 ETKHTVEQNMYQLSKELSI 319
|:|||||.|||||||||||
RBAM_026240__ 301 ESKHTVEPNMYQLSKELSI 319
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.