Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04264 and RBAM_026240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04264___pfkA.1.9828.seq
# -bsequence dna-align/RBAM_026240___pfkA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04264___pfkA
# 2: RBAM_026240___pfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 962
# Identity: 806/962 (83.8%)
# Similarity: 806/962 (83.8%)
# Gaps: 4/962 ( 0.4%)
# Score: 3401.0
#
#
#=======================================
BSNT_04264___ 1 ATGAAACGTATAGGGGTATTAACGAGCGGCGGGGATTCCCCGGGAATGAA 50
|||||.||||||||.||.||||||||||||||||||||||||||.|||||
RBAM_026240__ 1 ATGAAGCGTATAGGAGTTTTAACGAGCGGCGGGGATTCCCCGGGTATGAA 50
BSNT_04264___ 51 CGCAGCAGTTCGCGCAGTAGTCAGAAAAGCGATCTATCATGACGTTGAAG 100
|||.||.||.|||||.||.||..|.|||||.|||||.||.|||||.||||
RBAM_026240__ 51 CGCTGCGGTGCGCGCGGTTGTGCGGAAAGCTATCTACCACGACGTCGAAG 100
BSNT_04264___ 101 TTTACGGTATTTACAACGGATACGCGGGATTGATCAGCGGAAAGATTGAA 150
|.|||||.|||||.|||||.||..|.|||||.|||||||||||.||.||.
RBAM_026240__ 101 TGTACGGAATTTATAACGGTTATTCAGGATTAATCAGCGGAAAAATAGAG 150
BSNT_04264___ 151 AAGCTTGAACTCGGATCAGTAGGCGATATTATACATCGTGGAGGAACTAA 200
||.||.||.||.||.||.||.||.||.||.||.||.||.||.|||||.||
RBAM_026240__ 151 AAACTGGAGCTTGGTTCGGTCGGTGACATCATCCACCGCGGCGGAACAAA 200
BSNT_04264___ 201 GCTTTATACGGCAAGATGTCCTGAATTCAAAACAGTTGAAGGCCGTGAAA 250
|||.||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_026240__ 201 GCTGTATACGGCCAGATGTCCTGAATTCAAAACAGTTGAAGGCCGTGAAA 250
BSNT_04264___ 251 AAGGGATAGAAAACTTGAAGAAGCTTGGTATTGAAGGCCTTGTTGTTATC 300
||||.||.|||||.||.|||||.||.||.||||||||.|||||.||.|||
RBAM_026240__ 251 AAGGAATCGAAAATTTAAAGAAACTCGGCATTGAAGGTCTTGTCGTCATC 300
BSNT_04264___ 301 GGCGGAGACGGTTCATATATGGGTGCGAAAAAATTAACGGAACACGGGTT 350
|||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_026240__ 301 GGCGGAGACGGTTCATACATGGGTGCGAAAAAATTAACGGAACACGGGTT 350
BSNT_04264___ 351 TCCATGTGTAGGTGTACCGGGTACAATTGATAATGACATTCCGGGCACTG 400
|||.||||||||||||||||||||.||.|||||||||||.|||||.||||
RBAM_026240__ 351 TCCGTGTGTAGGTGTACCGGGTACGATAGATAATGACATCCCGGGAACTG 400
BSNT_04264___ 401 ATTTTACAATCGGTTTCGATACAGCTTTAAATACAGTAATTGACGCAATT 450
|||||||.|||||.||.|||||.||.|||||.||.||||||||.||.|||
RBAM_026240__ 401 ATTTTACGATCGGATTTGATACGGCGTTAAACACCGTAATTGATGCGATT 450
BSNT_04264___ 451 GATAAGATTCGCGATACAGCGACTTCTCATGAACGTACATATGTAATCGA 500
|||||.||.||.||.||.||.||.||||||||.||||||||.||.||.||
RBAM_026240__ 451 GATAAAATCCGTGACACCGCTACGTCTCATGAGCGTACATACGTTATTGA 500
BSNT_04264___ 501 AGTAATGGGCCGTCATGCCGGCGATATCGCATTGTGGGCCGGTCTTGCAG 550
|||.|||||.||.|||||.|||||.||.||.||.|||||.||||||||||
RBAM_026240__ 501 AGTGATGGGGCGCCATGCGGGCGACATTGCTTTATGGGCAGGTCTTGCAG 550
BSNT_04264___ 551 GGGGCGCGGAATCGATCTTAATCCCTGAGGCAGACTATGACATGCACGAA 600
|.||.||||||||.||.|||||.|||||.||.|||||.||.|||||.|||
RBAM_026240__ 551 GCGGAGCGGAATCAATTTTAATTCCTGAAGCGGACTACGATATGCAGGAA 600
BSNT_04264___ 601 ATCATTGCCCGCTTAAAACGCGGCCACGAACGCGGCAAGAAGCACAGTAT 650
||.||.|.|||.||.||..|.||.|||||.||||||||.||.||||||||
RBAM_026240__ 601 ATTATCGGCCGTTTGAAGAGAGGGCACGACCGCGGCAAAAAACACAGTAT 650
BSNT_04264___ 651 TATTATTGTTGCCGAAGGTGTAGGCAGCGGTGTTGAATTCGGGAAACGCA 700
.||.||.|||||.|||||.|||||||||||.|||||||||||.|||||||
RBAM_026240__ 651 CATCATCGTTGCAGAAGGGGTAGGCAGCGGGGTTGAATTCGGAAAACGCA 700
BSNT_04264___ 701 TTGAAGAAGAAACAAATCTTGAAACTAGGGTATCTGTATTGGGCCATATC 750
|.|||||||||||.||.||||||||..|||||||.||.||.||.||.|||
RBAM_026240__ 701 TCGAAGAAGAAACGAACCTTGAAACACGGGTATCCGTTTTAGGGCACATC 750
BSNT_04264___ 751 CAGCGCGGAGGTTCTCCGAGTGCTGCTGACCGTGTGTTAGCAAGCCGTCT 800
||||||||.||.|||||.||.|||.|||||||.||..|.||||||||.||
RBAM_026240__ 751 CAGCGCGGCGGATCTCCAAGCGCTTCTGACCGGGTTCTTGCAAGCCGCCT 800
BSNT_04264___ 801 CGGCGCATATGCAGTTGAACTGCTGCTTGAAGGAAAAGGCGGACGCTGTG 850
||||||.||.||.|||||.||.||||||.|||||||||||||||||||.|
RBAM_026240__ 801 CGGCGCTTACGCGGTTGAGCTTCTGCTTAAAGGAAAAGGCGGACGCTGCG 850
BSNT_04264___ 851 TAGGTATACAAAACAATAAGCTTGTAGACCATGATATTATAGAAATACTT 900
||||||||||||||||.||||||||||||||||||||||||||||| ||
RBAM_026240__ 851 TAGGTATACAAAACAACAAGCTTGTAGACCATGATATTATAGAAAT--TT 898
BSNT_04264___ 901 GAGA--CAAAACACACAGTTGAGCAAAACATGTATCAGCTTTCAAAAGAA 948
.||| |||||||.||.|||||.|.|||||||||||||||||||||||||
RBAM_026240__ 899 TAGAATCAAAACATACTGTTGAACCAAACATGTATCAGCTTTCAAAAGAA 948
BSNT_04264___ 949 CTGTCTATCTAA 960
||||||||.|||
RBAM_026240__ 949 CTGTCTATTTAA 960
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