Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04264 and RBAM_026240

See Amino acid alignment / Visit BSNT_04264 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence dna-align/BSNT_04264___pfkA.1.9828.seq
#    -bsequence dna-align/RBAM_026240___pfkA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04264___pfkA-RBAM_026240___pfkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04264___pfkA
# 2: RBAM_026240___pfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 962
# Identity:     806/962 (83.8%)
# Similarity:   806/962 (83.8%)
# Gaps:           4/962 ( 0.4%)
# Score: 3401.0
# 
#
#=======================================

BSNT_04264___      1 ATGAAACGTATAGGGGTATTAACGAGCGGCGGGGATTCCCCGGGAATGAA     50
                     |||||.||||||||.||.||||||||||||||||||||||||||.|||||
RBAM_026240__      1 ATGAAGCGTATAGGAGTTTTAACGAGCGGCGGGGATTCCCCGGGTATGAA     50

BSNT_04264___     51 CGCAGCAGTTCGCGCAGTAGTCAGAAAAGCGATCTATCATGACGTTGAAG    100
                     |||.||.||.|||||.||.||..|.|||||.|||||.||.|||||.||||
RBAM_026240__     51 CGCTGCGGTGCGCGCGGTTGTGCGGAAAGCTATCTACCACGACGTCGAAG    100

BSNT_04264___    101 TTTACGGTATTTACAACGGATACGCGGGATTGATCAGCGGAAAGATTGAA    150
                     |.|||||.|||||.|||||.||..|.|||||.|||||||||||.||.||.
RBAM_026240__    101 TGTACGGAATTTATAACGGTTATTCAGGATTAATCAGCGGAAAAATAGAG    150

BSNT_04264___    151 AAGCTTGAACTCGGATCAGTAGGCGATATTATACATCGTGGAGGAACTAA    200
                     ||.||.||.||.||.||.||.||.||.||.||.||.||.||.|||||.||
RBAM_026240__    151 AAACTGGAGCTTGGTTCGGTCGGTGACATCATCCACCGCGGCGGAACAAA    200

BSNT_04264___    201 GCTTTATACGGCAAGATGTCCTGAATTCAAAACAGTTGAAGGCCGTGAAA    250
                     |||.||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_026240__    201 GCTGTATACGGCCAGATGTCCTGAATTCAAAACAGTTGAAGGCCGTGAAA    250

BSNT_04264___    251 AAGGGATAGAAAACTTGAAGAAGCTTGGTATTGAAGGCCTTGTTGTTATC    300
                     ||||.||.|||||.||.|||||.||.||.||||||||.|||||.||.|||
RBAM_026240__    251 AAGGAATCGAAAATTTAAAGAAACTCGGCATTGAAGGTCTTGTCGTCATC    300

BSNT_04264___    301 GGCGGAGACGGTTCATATATGGGTGCGAAAAAATTAACGGAACACGGGTT    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_026240__    301 GGCGGAGACGGTTCATACATGGGTGCGAAAAAATTAACGGAACACGGGTT    350

BSNT_04264___    351 TCCATGTGTAGGTGTACCGGGTACAATTGATAATGACATTCCGGGCACTG    400
                     |||.||||||||||||||||||||.||.|||||||||||.|||||.||||
RBAM_026240__    351 TCCGTGTGTAGGTGTACCGGGTACGATAGATAATGACATCCCGGGAACTG    400

BSNT_04264___    401 ATTTTACAATCGGTTTCGATACAGCTTTAAATACAGTAATTGACGCAATT    450
                     |||||||.|||||.||.|||||.||.|||||.||.||||||||.||.|||
RBAM_026240__    401 ATTTTACGATCGGATTTGATACGGCGTTAAACACCGTAATTGATGCGATT    450

BSNT_04264___    451 GATAAGATTCGCGATACAGCGACTTCTCATGAACGTACATATGTAATCGA    500
                     |||||.||.||.||.||.||.||.||||||||.||||||||.||.||.||
RBAM_026240__    451 GATAAAATCCGTGACACCGCTACGTCTCATGAGCGTACATACGTTATTGA    500

BSNT_04264___    501 AGTAATGGGCCGTCATGCCGGCGATATCGCATTGTGGGCCGGTCTTGCAG    550
                     |||.|||||.||.|||||.|||||.||.||.||.|||||.||||||||||
RBAM_026240__    501 AGTGATGGGGCGCCATGCGGGCGACATTGCTTTATGGGCAGGTCTTGCAG    550

BSNT_04264___    551 GGGGCGCGGAATCGATCTTAATCCCTGAGGCAGACTATGACATGCACGAA    600
                     |.||.||||||||.||.|||||.|||||.||.|||||.||.|||||.|||
RBAM_026240__    551 GCGGAGCGGAATCAATTTTAATTCCTGAAGCGGACTACGATATGCAGGAA    600

BSNT_04264___    601 ATCATTGCCCGCTTAAAACGCGGCCACGAACGCGGCAAGAAGCACAGTAT    650
                     ||.||.|.|||.||.||..|.||.|||||.||||||||.||.||||||||
RBAM_026240__    601 ATTATCGGCCGTTTGAAGAGAGGGCACGACCGCGGCAAAAAACACAGTAT    650

BSNT_04264___    651 TATTATTGTTGCCGAAGGTGTAGGCAGCGGTGTTGAATTCGGGAAACGCA    700
                     .||.||.|||||.|||||.|||||||||||.|||||||||||.|||||||
RBAM_026240__    651 CATCATCGTTGCAGAAGGGGTAGGCAGCGGGGTTGAATTCGGAAAACGCA    700

BSNT_04264___    701 TTGAAGAAGAAACAAATCTTGAAACTAGGGTATCTGTATTGGGCCATATC    750
                     |.|||||||||||.||.||||||||..|||||||.||.||.||.||.|||
RBAM_026240__    701 TCGAAGAAGAAACGAACCTTGAAACACGGGTATCCGTTTTAGGGCACATC    750

BSNT_04264___    751 CAGCGCGGAGGTTCTCCGAGTGCTGCTGACCGTGTGTTAGCAAGCCGTCT    800
                     ||||||||.||.|||||.||.|||.|||||||.||..|.||||||||.||
RBAM_026240__    751 CAGCGCGGCGGATCTCCAAGCGCTTCTGACCGGGTTCTTGCAAGCCGCCT    800

BSNT_04264___    801 CGGCGCATATGCAGTTGAACTGCTGCTTGAAGGAAAAGGCGGACGCTGTG    850
                     ||||||.||.||.|||||.||.||||||.|||||||||||||||||||.|
RBAM_026240__    801 CGGCGCTTACGCGGTTGAGCTTCTGCTTAAAGGAAAAGGCGGACGCTGCG    850

BSNT_04264___    851 TAGGTATACAAAACAATAAGCTTGTAGACCATGATATTATAGAAATACTT    900
                     ||||||||||||||||.|||||||||||||||||||||||||||||  ||
RBAM_026240__    851 TAGGTATACAAAACAACAAGCTTGTAGACCATGATATTATAGAAAT--TT    898

BSNT_04264___    901 GAGA--CAAAACACACAGTTGAGCAAAACATGTATCAGCTTTCAAAAGAA    948
                     .|||  |||||||.||.|||||.|.|||||||||||||||||||||||||
RBAM_026240__    899 TAGAATCAAAACATACTGTTGAACCAAACATGTATCAGCTTTCAAAAGAA    948

BSNT_04264___    949 CTGTCTATCTAA    960
                     ||||||||.|||
RBAM_026240__    949 CTGTCTATTTAA    960


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