Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04263 and RBAM_026230

See DNA alignment / Visit BSNT_04263 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence pep-align/BSNT_04263___pyk.1.9828.seq
#    -bsequence pep-align/RBAM_026230___pyk.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04263___pyk-RBAM_026230___pyk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04263___pyk-RBAM_026230___pyk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04263___pyk
# 2: RBAM_026230___pyk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     519/585 (88.7%)
# Similarity:   554/585 (94.7%)
# Gaps:           0/585 ( 0.0%)
# Score: 2603.0
# 
#
#=======================================

BSNT_04263___      1 MRKTKIVCTIGPASESIEMLTKLMESGMNVARLNFSHGDFEEHGARIKNI     50
                     |:||||||||||||||:||||||||:||||||||||||||||||||||||
RBAM_026230__      1 MKKTKIVCTIGPASESVEMLTKLMEAGMNVARLNFSHGDFEEHGARIKNI     50

BSNT_04263___     51 REASKKLGKNVGILLDTKGPEIRTHTMENGGIELETGKELIISMDEVVGT    100
                     |||||||||||||||||||||||||.||||.:||:.|.|:|:|..:|:||
RBAM_026230__     51 REASKKLGKNVGILLDTKGPEIRTHDMENGALELQAGNEIIVSTKQVLGT    100

BSNT_04263___    101 TDKISVTYEGLVHDVEQGSTILLDDGLIGLEVLDVDAAKREIKTKVLNNG    150
                     ..|.||:||||..||..||.|||||||||||||:.:..|.|||||:||:|
RBAM_026230__    101 LGKFSVSYEGLADDVSAGSIILLDDGLIGLEVLESNPEKHEIKTKILNSG    150

BSNT_04263___    151 TLKNKKGVNVPGVSVNLPGITEKDARDIVFGIEQGVDFIAPSFIRRSTDV    200
                     |||||||||||||||||||||||||:||||||||||||||.||:||||||
RBAM_026230__    151 TLKNKKGVNVPGVSVNLPGITEKDAKDIVFGIEQGVDFIAASFVRRSTDV    200

BSNT_04263___    201 LEIRELLEEHNAQEIQIIPKIENQEGVDNIDAILEVSDGLMVARGDLGVE    250
                     ||||||||||||.:|||||||||||||||:||||||||||||||||||||
RBAM_026230__    201 LEIRELLEEHNASDIQIIPKIENQEGVDNLDAILEVSDGLMVARGDLGVE    250

BSNT_04263___    251 IPAEEVPLVQKELIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVAN    300
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
RBAM_026230__    251 IPAEEVPLVQKEMIKKCNALGKPVITATQMLDSMQRNPRPTRAEASDVAN    300

BSNT_04263___    301 AIFDGTDAIMLSGETAAGSYPVEAVQTMHNIASRSEEALNYKEILSKRRD    350
                     ||||||||||||||||||.|||||||||.|||:|:||:||||||||||||
RBAM_026230__    301 AIFDGTDAIMLSGETAAGQYPVEAVQTMFNIATRTEESLNYKEILSKRRD    350

BSNT_04263___    351 QVGMTITDAIGQSVAHTAINLNAAAIVTPTESGHTARMIAKYRPQAPIVA    400
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_026230__    351 QVGMTITDAIGQSVAHTAINLSAAAIVTPTESGHTARMIAKYRPQAPIVA    400

BSNT_04263___    401 VTVNDSISRKLALVSGVFAESGQNASSTDEMLEDAVQKSLNSGIVKHGDL    450
                     ||||:|:||||.||.|||..|||||:||||||||||||||:|||||.|||
RBAM_026230__    401 VTVNESVSRKLGLVFGVFPSSGQNANSTDEMLEDAVQKSLDSGIVKRGDL    450

BSNT_04263___    451 IVITAGTVGESGTTNLMKVHTVGDIVAKGQGIGRKSAYGPVVVAQNAKEA    500
                     ||||||:||||||||||||||||.|:|||||||||||:||||||:|||||
RBAM_026230__    451 IVITAGSVGESGTTNLMKVHTVGSIIAKGQGIGRKSAFGPVVVAKNAKEA    500

BSNT_04263___    501 EQKMTDGAVLVTKSTDRDMIASLEKASALITEEGGLTSHAAVVGLSLGIP    550
                     |||||||||||..|||||||||||||||||||||||||||||||||||||
RBAM_026230__    501 EQKMTDGAVLVASSTDRDMIASLEKASALITEEGGLTSHAAVVGLSLGIP    550

BSNT_04263___    551 VIVGLENATSILTDGQDITVDASRGAVYQGRASVL    585
                     ||||||||||:||:||.|||||:|||||:||||||
RBAM_026230__    551 VIVGLENATSVLTEGQVITVDAARGAVYEGRASVL    585


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