Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04252 and RBAM_026160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence pep-align/BSNT_04252___mdh.1.9828.seq
# -bsequence pep-align/RBAM_026160___mdh.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04252___mdh-RBAM_026160___mdh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04252___mdh-RBAM_026160___mdh.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04252___mdh
# 2: RBAM_026160___mdh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity: 302/312 (96.8%)
# Similarity: 308/312 (98.7%)
# Gaps: 0/312 ( 0.0%)
# Score: 1513.0
#
#
#=======================================
BSNT_04252___ 1 MGNTRKKVSVIGAGFTGATTAFLIAQKELADVVLVDIPQLENPTKGKALD 50
||.||.|||||||||||||||||.||||||||||||||||||||||||||
RBAM_026160__ 1 MGKTRSKVSVIGAGFTGATTAFLTAQKELADVVLVDIPQLENPTKGKALD 50
BSNT_04252___ 51 MLEASPVQGFDAKITGTSNYEDTAGSDIVVITAGIARKPGMSRDDLVSSN 100
||||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_026160__ 51 MLEASPVQGFDAKITGTSNYEDTAGSDIVVITAGIARKPGMSRDDLVSTN 100
BSNT_04252___ 101 EKIMRSVTREIVKYSPDSIIVVLTNPVDAMTYAVYKESGFPKERVIGQSG 150
|||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_026160__ 101 EKIMRSVTREIVKYSPDCIIVVLTNPVDAMTYAVYKESGFPKERVIGQSG 150
BSNT_04252___ 151 VLDTARFRTFVAEELNLSVKDVTGFVLGGHGDDMVPLVRYSYAGGIPLET 200
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026160__ 151 VLDTARFRTFVAEELNLSVKDVTGFVLGGHGDDMVPLVRYSYAGGIPLET 200
BSNT_04252___ 201 LIPKERIDAIVERTRKGGGEIVNLLGNGSAYYAPAASLTEMVEAILKDQR 250
||||:|:|||||||||||||||||||||||||||||||||||||||||||
RBAM_026160__ 201 LIPKDRLDAIVERTRKGGGEIVNLLGNGSAYYAPAASLTEMVEAILKDQR 250
BSNT_04252___ 251 RVLPTIAYLEGEYGYEGIYLGVPTIIGGNGLEQIIELELTDYERAQLNKS 300
||||||||||||||:||||||||||||||||||||||||||||:|||:||
RBAM_026160__ 251 RVLPTIAYLEGEYGHEGIYLGVPTIIGGNGLEQIIELELTDYEKAQLSKS 300
BSNT_04252___ 301 VESVKNVMKVLS 312
||||||||||||
RBAM_026160__ 301 VESVKNVMKVLS 312
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