Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04252 and RBAM_026160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04252___mdh.1.9828.seq
# -bsequence dna-align/RBAM_026160___mdh.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04252___mdh-RBAM_026160___mdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04252___mdh-RBAM_026160___mdh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04252___mdh
# 2: RBAM_026160___mdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 940
# Identity: 789/940 (83.9%)
# Similarity: 789/940 (83.9%)
# Gaps: 2/940 ( 0.2%)
# Score: 3329.0
#
#
#=======================================
BSNT_04252___ 1 ATGGGAAATACTCGTAAAAAAGTTTCTGTTATCGGAGCAGGTTTTACCGG 50
||||||||.||.||.|..|||||||||||||||||||||||.|||||.||
RBAM_026160__ 1 ATGGGAAAAACACGCAGTAAAGTTTCTGTTATCGGAGCAGGATTTACGGG 50
BSNT_04252___ 51 AGCTACAACTGCATTTTTAATCGCTCAAAAAGAGCTGGCAGACGTTGTTC 100
|||.|||||.||.|||.|.|..||||||||||||||.||.||||||||.|
RBAM_026160__ 51 AGCGACAACAGCCTTTCTGACAGCTCAAAAAGAGCTTGCGGACGTTGTGC 100
BSNT_04252___ 101 TTGTTGACATTCCGCAATTGGAGAACCCGACAAAGGGAAAAGCGCTTGAT 150
|.|||||.|||||||||||.||.|||||||||||.|||||||||||.||.
RBAM_026160__ 101 TCGTTGATATTCCGCAATTAGAAAACCCGACAAAAGGAAAAGCGCTAGAC 150
BSNT_04252___ 151 ATGCTTGAAGCAAGCCCGGTTCAAGGCTTTGACGCAAAAATTACGGGAAC 200
|||||.||||||||.|||||||||||.||||||||.|||||.||.||.||
RBAM_026160__ 151 ATGCTCGAAGCAAGTCCGGTTCAAGGATTTGACGCGAAAATCACAGGCAC 200
BSNT_04252___ 201 ATCCAATTACGAGGATACAGCTGGCTCTGACATTGTTGTCATTACAGCCG 250
.|||||.||||||||.|||||.||.|||||.||.||.|||||.|||||||
RBAM_026160__ 201 GTCCAACTACGAGGACACAGCCGGTTCTGATATCGTCGTCATCACAGCCG 250
BSNT_04252___ 251 GTATCGCAAGAAAACCTGGTATGAGCAGAGATGATCTGGTCTCTTCAAAC 300
|.||.||.||||||||.||.||||||.|.||||||||.||.|||.|||||
RBAM_026160__ 251 GAATTGCGAGAAAACCGGGCATGAGCCGTGATGATCTCGTATCTACAAAC 300
BSNT_04252___ 301 GAAAAGATTATGAGAAGCGTTACCCGGGAAATCGTGAAATATTCTCCTGA 350
|||||.||.|||||||||||.||.||.||.||||||||||||||||||||
RBAM_026160__ 301 GAAAAAATCATGAGAAGCGTCACACGTGAGATCGTGAAATATTCTCCTGA 350
BSNT_04252___ 351 CTCTATTATTGTGGTGCTGACAAATCCTGTTGATGCAATGACATACGCGG 400
||..|||||.||.||..|||||||.|||||||||||.||||||||.||||
RBAM_026160__ 351 CTGCATTATCGTTGTATTGACAAACCCTGTTGATGCGATGACATATGCGG 400
BSNT_04252___ 401 TGTACAAAGAATCAGGCTTCCCTAAAGAGCGTGTAATCGGCCAGTCCGGT 450
||||||||||||||||||||||.|||||.||.||.|||||.||.|||||.
RBAM_026160__ 401 TGTACAAAGAATCAGGCTTCCCGAAAGAACGCGTCATCGGACAATCCGGA 450
BSNT_04252___ 451 GTGCTTGATACGGCAAGATTCAGAACATTTGTGGCAGAGGAATTAAACCT 500
||||||||.||.||..|||||||||||||.||.||.||.|||||||||||
RBAM_026160__ 451 GTGCTTGACACTGCGCGATTCAGAACATTCGTCGCTGAAGAATTAAACCT 500
BSNT_04252___ 501 GTCAGTGAAAGATGTGACTGGTTTCGTACTCGGCGGACACGGTGACGATA 550
|||.||.|||||||||||.|||||.||.||.|||||||||||||||||.|
RBAM_026160__ 501 GTCTGTAAAAGATGTGACCGGTTTTGTTCTTGGCGGACACGGTGACGACA 550
BSNT_04252___ 551 TGGTGCCGCTTGTGCGTTATTCTTATGCTGGCGGTATCCCGCTTGAAACT 600
||||.||.||.||.||||||||.|||||.|||||.||.|||||||||||.
RBAM_026160__ 551 TGGTTCCTCTCGTCCGTTATTCCTATGCGGGCGGCATTCCGCTTGAAACG 600
BSNT_04252___ 601 CTTATTCCGAAAGAACGGATTGACGCAATTGTGGAGCGCACTAGAAAAGG 650
|||||.||||||||.||..||||.||.|||||.||.||.||.||||||||
RBAM_026160__ 601 CTTATCCCGAAAGACCGTCTTGATGCGATTGTAGAACGTACAAGAAAAGG 650
BSNT_04252___ 651 CGGAGGCGAAATCGTGAATCTTCTTGGAAACGGAAGCGCGTATTATGCGC 700
|||.||.||||||||.||.|||||.||.|||||||||||.||.||.||||
RBAM_026160__ 651 CGGCGGGGAAATCGTCAACCTTCTCGGCAACGGAAGCGCCTACTACGCGC 700
BSNT_04252___ 701 CTGCGGCTTCTCTGACAGAAATGGTCGAAGCGATCTTGAAAGATCAGCGC 750
||||.||.||.|||||.||||||||.|||||.||.|||||||||||||||
RBAM_026160__ 701 CTGCTGCATCACTGACTGAAATGGTAGAAGCCATTTTGAAAGATCAGCGC 750
BSNT_04252___ 751 CGCGTCCTTCCTACAATTGCTTATCTT-GAAGGGGAATACGGCTATGAAG 799
|||||.|||||.||.||.||||| ||| |||||.||||||||..||||||
RBAM_026160__ 751 CGCGTGCTTCCGACCATCGCTTA-CTTAGAAGGCGAATACGGTCATGAAG 799
BSNT_04252___ 800 GCATCTACCTTGGTGTTCCTACAATTATAGGCGGCAACGGTCTTGAGCAA 849
||||.|||.|.||.||.||.||.|||||.||.||.|||||.||.||||||
RBAM_026160__ 800 GCATTTACTTAGGCGTACCGACGATTATCGGAGGAAACGGCCTAGAGCAA 849
BSNT_04252___ 850 ATCATTGAACTTGAACTGACAGACTATGAAAGAGCGCAGCTGAATAAATC 899
|||||.||.||||||||||||||||||||||.|||||||||||.||||||
RBAM_026160__ 850 ATCATCGAGCTTGAACTGACAGACTATGAAAAAGCGCAGCTGAGTAAATC 899
BSNT_04252___ 900 AGTAGAATCTGTCAAAAATGTCATGAAAGTATTATCCTAA 939
|||.|||||||||||||||||.|||||||||||.||.|||
RBAM_026160__ 900 AGTTGAATCTGTCAAAAATGTGATGAAAGTATTGTCATAA 939
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