Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04250 and RBAM_026150

See DNA alignment / Visit BSNT_04250 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence pep-align/BSNT_04250___phoP.1.9828.seq
#    -bsequence pep-align/RBAM_026150___phoP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04250___phoP-RBAM_026150___phoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04250___phoP-RBAM_026150___phoP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04250___phoP
# 2: RBAM_026150___phoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     210/240 (87.5%)
# Similarity:   228/240 (95.0%)
# Gaps:           1/240 ( 0.4%)
# Score: 1078.0
# 
#
#=======================================

BSNT_04250___      1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLI     50
                     |||||||||||:|||||||||||||||||||||||||||:.||.|.||||
RBAM_026150__      1 MNKKILVVDDEQSIVTLLQYNLERSGYDVITASDGEEALELAENENPDLI     50

BSNT_04250___     51 VLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDY    100
                     ||||||||:|||:|||||||||:|.|||||||||||||||||||||||||
RBAM_026150__     51 VLDVMLPKVDGIDVCKQLRQQKMMVPILMLTAKDEEFDKVLGLELGADDY    100

BSNT_04250___    101 MTKPFSPREVNARVKAILRRSEIAAPSSEMKNDEMEGQIVIGDLKILPDH    150
                     ||||||||||.|||||||||::|:: .|:.:.:|.:|||:||:|||||:|
RBAM_026150__    101 MTKPFSPREVTARVKAILRRADISS-LSQGREEEKDGQILIGELKILPEH    149

BSNT_04250___    151 YEAYFKESQLELTPKEFELLLYLGRHKGRVLTRDLLLSAVWNYDFAGDTR    200
                     ||||||..||||||||||||||||:|||||||||||||||||||||||||
RBAM_026150__    150 YEAYFKSEQLELTPKEFELLLYLGKHKGRVLTRDLLLSAVWNYDFAGDTR    199

BSNT_04250___    201 IVDVHISHLRDKIENNTKKPIYIKTIRGLGYKLEEPKMNE    240
                     ||||||||||||||:|||||||||||||||||||||||||
RBAM_026150__    200 IVDVHISHLRDKIESNTKKPIYIKTIRGLGYKLEEPKMNE    239


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