Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04250 and RBAM_026150
See
Amino acid alignment /
Visit
BSNT_04250 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04250___phoP.1.9828.seq
# -bsequence dna-align/RBAM_026150___phoP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04250___phoP-RBAM_026150___phoP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04250___phoP-RBAM_026150___phoP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04250___phoP
# 2: RBAM_026150___phoP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 735
# Identity: 589/735 (80.1%)
# Similarity: 589/735 (80.1%)
# Gaps: 27/735 ( 3.7%)
# Score: 2370.0
#
#
#=======================================
BSNT_04250___ 1 ATGAACAAGAAAATTTTAGTTGTGGATGATGAAGAATCTATTGTTACTCT 50
||||||||.||||||||||||||.|||||||||.|||||||.||||||||
RBAM_026150__ 1 ATGAACAAAAAAATTTTAGTTGTAGATGATGAACAATCTATCGTTACTCT 50
BSNT_04250___ 51 TTTACAGTACAATTTGGAACGGTCAGGCTATGATGTCATTACCGCCTCGG 100
|||||||||.|||.||||||||||.||||||||||||||||||||.||.|
RBAM_026150__ 51 TTTACAGTATAATCTGGAACGGTCCGGCTATGATGTCATTACCGCATCAG 100
BSNT_04250___ 101 ATGGGGAAGAAGCACTCAAAAAAGC-GGAAACAGAG------AAGCCTGA 143
|.||.|||||.||.|| ..||| || ||||| ||.||.||
RBAM_026150__ 101 ACGGTGAAGAGGCTCT----GGAGCTGG---CAGAGAATGAAAACCCGGA 143
BSNT_04250___ 144 TTTGATTGTGCTTGATGTGATGCTTCCAAAATTGGACGGAATCGAAGTAT 193
|||.||.||.||.|||||.|||||.||||||.|||||||||||||.||.|
RBAM_026150__ 144 TTTAATCGTACTGGATGTCATGCTGCCAAAAGTGGACGGAATCGACGTCT 193
BSNT_04250___ 194 GCAAGCAGCTGAGACAGCAAAAACTGATGTTTCCCATTTTAATGCTGACA 243
|.||||||||.||||||||.|||.|||||.||||.||.||.|||||||||
RBAM_026150__ 194 GTAAGCAGCTCAGACAGCAGAAAATGATGGTTCCAATCTTGATGCTGACA 243
BSNT_04250___ 244 GCGAAGGATGAGGAATTCGACAAAGTATTAGGGCTGGAGCTCGGTGCTGA 293
||.||.||||||||.||.||.|||||..|.||.|||||||||||.||.||
RBAM_026150__ 244 GCAAAAGATGAGGAGTTTGATAAAGTGCTGGGACTGGAGCTCGGAGCGGA 293
BSNT_04250___ 294 TGATTATATGACCAAGCCGTTCAGTCCAAGGGAAGTAAATGCGAGAGTCA 343
||||||.|||||.||||||||||||||..|||||||.|.||||.|.||.|
RBAM_026150__ 294 TGATTACATGACAAAGCCGTTCAGTCCGCGGGAAGTCACTGCGCGGGTGA 343
BSNT_04250___ 344 AAGCGATTTTAAGGCGTTCGGAAATAGCTGCGC--CCTCTAGTGAGATGA 391
||||.||||||||..|..|.||.||..||.||| .|.|.||..||
RBAM_026150__ 344 AAGCCATTTTAAGAAGGGCTGACATTTCTTCGCTGTCACAAGGCAG---- 389
BSNT_04250___ 392 AGAACGATGAAATGGAAGGCCAGATCGTAATCGGCGATCTGAAAATCCTG 441
|||| ||.||||.|||.||.||||||.|.||||||||.||||||||.||.
RBAM_026150__ 390 AGAA-GAGGAAAAGGACGGGCAGATCCTCATCGGCGAGCTGAAAATTCTT 438
BSNT_04250___ 442 CCTGATCATTATGAAGCGTACTTTAA---AGAAAGTCAGCTTGAACTGAC 488
||.||.|||||.|||||||||||.|| |||| |||||.|||.||||
RBAM_026150__ 439 CCGGAGCATTACGAAGCGTACTTCAAGTCAGAA---CAGCTGGAATTGAC 485
BSNT_04250___ 489 ACCGAAAGAATTCGAACTGTTGCTCTATTTAGGCAGACATAAAGGCAGAG 538
.||.||||||||.||||||.|.||.|||||.||.|.||||||.||.||||
RBAM_026150__ 486 GCCTAAAGAATTTGAACTGCTTCTGTATTTGGGAAAACATAAGGGAAGAG 535
BSNT_04250___ 539 TTCTGACAAGAGACCTGCTGCTGAGCGCAGTCTGGAATTATGATTTTGCC 588
|.|||||.|||||.||.|||||||||||.||||||||.||||||||||||
RBAM_026150__ 536 TGCTGACGAGAGATCTTCTGCTGAGCGCGGTCTGGAACTATGATTTTGCC 585
BSNT_04250___ 589 GGAGATACGAGAATTGTTGATGTGCACATCAGCCATCTTCGCGACAAAAT 638
||.|||||..|.||||||||.||.||.|||||||||||.|||||||||||
RBAM_026150__ 586 GGGGATACCCGGATTGTTGACGTTCATATCAGCCATCTGCGCGACAAAAT 635
BSNT_04250___ 639 TGAAAACAATACCAAAAAACCGATCTACATTAAAACGATTAGGGGATTGG 688
.|||...||||||||||||||.|||||.||||||||.||.||.||.||||
RBAM_026150__ 636 CGAATCAAATACCAAAAAACCCATCTATATTAAAACAATCAGAGGTTTGG 685
BSNT_04250___ 689 GGTATAAACTGGAGGAGCCAAAAATGAATGAATAA 723
|||||||||||||||||||||||||||||||||||
RBAM_026150__ 686 GGTATAAACTGGAGGAGCCAAAAATGAATGAATAA 720
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.