Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04247 and RBAM_026130

See DNA alignment / Visit BSNT_04247 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_04247___polA.1.9828.seq
#    -bsequence pep-align/RBAM_026130___polA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04247___polA-RBAM_026130___polA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04247___polA-RBAM_026130___polA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04247___polA
# 2: RBAM_026130___polA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     778/880 (88.4%)
# Similarity:   830/880 (94.3%)
# Gaps:           1/880 ( 0.1%)
# Score: 3975.0
# 
#
#=======================================

BSNT_04247___      1 MTERKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLED     50
                     ||||||||||||||||||||||||||||:||:||||||||||||||||||
RBAM_026130__      1 MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLED     50

BSNT_04247___     51 EKPTHMLVAFDAGKTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAY    100
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
RBAM_026130__     51 EKPTHMLVAFDAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAY    100

BSNT_04247___    101 QISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVA    150
                     :||||||.:|||||||||||.||||:||||||.|||||||||||.|||||
RBAM_026130__    101 KISRYELPEYEADDIIGTLAVSAEKEGFEVKVVSGDKDLTQLATGKTTVA    150

BSNT_04247___    151 ITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGE    200
                     ||||||||||.||||||:|||||||.||||||||||||||||||||||||
RBAM_026130__    151 ITRKGITDVEDYTPEHVQEKYGLTPLQIIDMKGLMGDSSDNIPGVPGVGE    200

BSNT_04247___    201 KTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMT    250
                     ||||||||||.||||||:||||||||||||||||:|:|||||||||||||
RBAM_026130__    201 KTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQALMSKELATIMT    250

BSNT_04247___    251 DAPIEVSVSALEYQGFNREQVIAIFKDLGFNTLLERLGEDSAEAEQDQSL    300
                     :|||||....|:|:||:||||:|||||||||||||||||:|.|. .:::.
RBAM_026130__    251 NAPIEVKPEDLDYKGFDREQVVAIFKDLGFNTLLERLGEESGET-AEENF    299

BSNT_04247___    301 EDINVKTVTDVTSDILVSPSAFVVEQIGDNYHEEPILGFSIVNETGAYFI    350
                     |||||:|..::|.|:||||||.||||||||||||||||||||||||.|:|
RBAM_026130__    300 EDINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYI    349

BSNT_04247___    351 PKDTAVESEVFKEWVENDDQKKWVFDSKRAVVALRWQGIELKGAEFDTLL    400
                     ||:.|::||.||.|.|::..|||||||||:|||||||||||||.|||.||
RBAM_026130__    350 PKEIAIQSETFKSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALL    399

BSNT_04247___    401 AAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGAKRAVPSEDVLSEH    450
                     |||||||||||||||||||:|||:|||.||:|||||||||||:|..|::|
RBAM_026130__    400 AAYIINPGNSYDDVASVAKEYGLNIVSKDEAVYGKGAKRAVPAEKELADH    449

BSNT_04247___    451 LGRKALAIQSLREKLVQELENNDQLELFEELEMPLALILGEMESTGVKVD    500
                     |.|||.|:.|||:||:..||.|:||||:|:||:|||||||||||.|||||
RBAM_026130__    450 LARKASAVNSLRDKLLHALEENNQLELYEDLELPLALILGEMESMGVKVD    499

BSNT_04247___    501 VDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPV    550
                     |:|||||||||.|||||||||||:|||||||||||||||||||||:|||.
RBAM_026130__    500 VERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVILFEKLGLPP    549

BSNT_04247___    551 VKKTKTGYSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTR    600
                     |||||||||||||||||||||||||.:|||||||||||||||||||||||
RBAM_026130__    550 VKKTKTGYSTSADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTR    599

BSNT_04247___    601 PDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKD    650
                     .|||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_026130__    600 KDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPD    649

BSNT_04247___    651 WLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVAKDE    700
                     ||||||||||||||||||||||||||||||||||||||||||||||::||
RBAM_026130__    650 WLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDE    699

BSNT_04247___    701 VTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFQGV    750
                     ||.||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_026130__    700 VTQAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFPGV    749

BSNT_04247___    751 KAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAERTAMNTPI    800
                     |||||:|||||||||||||||.||||||||||||||:|||||||||||||
RBAM_026130__    750 KAYMEESVQEAKQKGYVTTLMQRRRYIPELTSRNFNLRSFAERTAMNTPI    799

BSNT_04247___    801 QGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEK    850
                     |||||||||||||||||:||||.|||||||||||||||||||||||||||
RBAM_026130__    800 QGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAPKEEIEILEK    849

BSNT_04247___    851 LVPEVMEHALALDVPLKVDFASGPSWYDAK    880
                     |||||||||||||||||.|:||||||||||
RBAM_026130__    850 LVPEVMEHALALDVPLKADYASGPSWYDAK    879


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04247 and RBAM_026130

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
