Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04246 and RBAM_026120

See DNA alignment / Visit BSNT_04246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_04246___mutM.1.9828.seq
#    -bsequence pep-align/RBAM_026120___mutM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04246___mutM-RBAM_026120___mutM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04246___mutM-RBAM_026120___mutM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04246___mutM
# 2: RBAM_026120___mutM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     245/278 (88.1%)
# Similarity:   259/278 (93.2%)
# Gaps:           0/278 ( 0.0%)
# Score: 1295.0
# 
#
#=======================================

BSNT_04246___      1 MDVPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLA     50
                     |.|||||||||||||||||||||||:|.:||||||||:|||||||||::|
RBAM_026120__      1 MIVPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIA     50

BSNT_04246___     51 GETIQSIGRRGKFLLFHLDHYVMVSHLRMEGKYGLHQAEEPDDKHVHVIF    100
                     ||||:|||||||||||||||||||||||||||||||||:|||||||||:|
RBAM_026120__     51 GETIRSIGRRGKFLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVF    100

BSNT_04246___    101 TMTDGTQLRYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYL    150
                     .|||||||||||||||||||||.||||...|||||||||||.|.||:|||
RBAM_026120__    101 HMTDGTQLRYRDVRKFGTMHLFAPGEEQNALPLSQLGPEPDDEAFTAAYL    150

BSNT_04246___    151 KERLAKTNRAVKTALLDQKTVVGLGNIYVDEALFRAGVHPETKANQLSDK    200
                     |||||||||||||||||||.||||||||||||||||.:|||||||.|||.
RBAM_026120__    151 KERLAKTNRAVKTALLDQKAVVGLGNIYVDEALFRARIHPETKANSLSDG    200

BSNT_04246___    201 TIKTLHAGIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHFVYGKKDEP    250
                     .|||||..||:||||||||||||||||||||||||||||:|:||||||||
RBAM_026120__    201 QIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLKHYVYGKKDEP    250

BSNT_04246___    251 CKNCGTMISKIVVGGRGTHFCAKCQTKK    278
                     ||.|||||||||||||||||||:||.|.
RBAM_026120__    251 CKTCGTMISKIVVGGRGTHFCARCQKKS    278


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