Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04240 and RBAM_026080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_04240___ytbD.1.9828.seq
# -bsequence pep-align/RBAM_026080___ytbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04240___ytbD-RBAM_026080___ytbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04240___ytbD-RBAM_026080___ytbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04240___ytbD
# 2: RBAM_026080___ytbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 327/399 (82.0%)
# Similarity: 363/399 (91.0%)
# Gaps: 3/399 ( 0.8%)
# Score: 1652.0
#
#
#=======================================
BSNT_04240___ 1 MTSANKSNIPALLALAVSAFAIGTTEFISVGLLPLIADDLDIPVTTAGLT 50
|:|..:|.:|||||||||||||||||||||||||||:.||.|||||||||
RBAM_026080__ 1 MSSHRQSYLPALLALAVSAFAIGTTEFISVGLLPLISQDLHIPVTTAGLT 50
BSNT_04240___ 51 VSLYALGVTFGAPILTSLTSSMSRKTLLLWIMFIFIAGNTMAATASSIGI 100
||:||||||||||:||||||.|||||||||:|.|||||||:||:|||||:
RBAM_026080__ 51 VSMYALGVTFGAPVLTSLTSGMSRKTLLLWVMLIFIAGNTLAASASSIGV 100
BSNT_04240___ 101 LLAARVISAFSHGVFMSIGSTIAADIVPEDKRASAISIMFTGLTVATVTG 150
|||||||||||||:|||||:||||:||||.||||||||||||||||||||
RBAM_026080__ 101 LLAARVISAFSHGIFMSIGATIAANIVPEHKRASAISIMFTGLTVATVTG 150
BSNT_04240___ 151 VPFGTFIGQQFGWRFAFMVIIAVGIIAFITNGILVPSKLRKGTKTTMRDQ 200
|||||::|||||||.||.||:|||||||:||.:||||.|||||||...:|
RBAM_026080__ 151 VPFGTYLGQQFGWRIAFAVIVAVGIIAFLTNALLVPSHLRKGTKTAFSEQ 200
BSNT_04240___ 201 LKLVTNSRLLLLFVITALGYGGTFVVFTYLSPLLQEVTGFKAGTVAVILL 250
:|||||.||||||:||||||||||||||||||||||||||:..|||.|||
RBAM_026080__ 201 VKLVTNGRLLLLFIITALGYGGTFVVFTYLSPLLQEVTGFQKETVAAILL 250
BSNT_04240___ 251 GYGIAIAIGNMIGGKLSNRNPIAALFYMFIVQAIVLFVLTFTAPYQAAGL 300
.|||||||||||||:||||||:.||||||||||.||||||||||::.|||
RBAM_026080__ 251 VYGIAIAIGNMIGGRLSNRNPLKALFYMFIVQAAVLFVLTFTAPFKTAGL 300
BSNT_04240___ 301 ITILCMGLLAFMNVPGLQVYVVMLAERFVPSAVDVASAMNIAAFNAGIAL 350
|||:.|||||||||||||||||||:|||.|||||.|||:||||||||||:
RBAM_026080__ 301 ITIIFMGLLAFMNVPGLQVYVVMLSERFAPSAVDTASALNIAAFNAGIAI 350
BSNT_04240___ 351 GSYLGGVITDSIGLIHTAWIGGLMVVGAVILTGWSRLMEKRDRQEA--- 396
||:.||:||||||:|||||||.|||:.||:||||||.:|||||...
RBAM_026080__ 351 GSFAGGIITDSIGIIHTAWIGALMVLSAVVLTGWSRKLEKRDRTVLERR 399
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