Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04235 and RBAM_026040

See DNA alignment / Visit BSNT_04235 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_04235___nrdR.1.9828.seq
#    -bsequence pep-align/RBAM_026040___nrdR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04235___nrdR-RBAM_026040___nrdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04235___nrdR-RBAM_026040___nrdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04235___nrdR
# 2: RBAM_026040___nrdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     142/152 (93.4%)
# Similarity:   146/152 (96.1%)
# Gaps:           0/152 ( 0.0%)
# Score: 737.0
# 
#
#=======================================

BSNT_04235___      1 MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLI     50
                     ||||||||||:|||||||.|:|||||||||||:||||||||||.||.|||
RBAM_026040__      1 MKCPSCQHNGSRVLDSRPADEGKSIRRRRECEACHYRFTTFEKFEEMPLI     50

BSNT_04235___     51 VVKKEGVREEFSREKMLRGLIKACGKRPVSLKTLEDMCFDIEKELRNQGC    100
                     ||||||||||||||||||||||||.||||.|||||||||||||||||||.
RBAM_026040__     51 VVKKEGVREEFSREKMLRGLIKACEKRPVPLKTLEDMCFDIEKELRNQGV    100

BSNT_04235___    101 SEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKK    150
                     ||||||||||||||||||||||:|||||||||||||||||||||||||||
RBAM_026040__    101 SEVKSELVGEMVMDRLAKIDEVSYVRFASVYRQFKDINVFIDELKDLIKK    150

BSNT_04235___    151 ER    152
                     ||
RBAM_026040__    151 ER    152


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