Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04234 and RBAM_026030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence pep-align/BSNT_04234___dnaB.1.9828.seq
# -bsequence pep-align/RBAM_026030___dnaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04234___dnaB-RBAM_026030___dnaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04234___dnaB-RBAM_026030___dnaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04234___dnaB
# 2: RBAM_026030___dnaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity: 368/472 (78.0%)
# Similarity: 422/472 (89.4%)
# Gaps: 3/472 ( 0.6%)
# Score: 1953.5
#
#
#=======================================
BSNT_04234___ 1 MADYWKDVLPVDPYVVKSRSMLQDIDRQIITQLYQPLIGPVAFSLYMTLW 50
|||||.||||||||.|||||:|||:|||::|.|||||||..|||||||||
RBAM_026030__ 1 MADYWNDVLPVDPYTVKSRSLLQDVDRQVLTHLYQPLIGSFAFSLYMTLW 50
BSNT_04234___ 51 GELEQNRLWGGESTHRQLMGMTQSNLKTIHQEQGKLEGIGLLKVYMKESE 100
||||||||||.||||||||||.|||||.||.||||||||||||||::|||
RBAM_026030__ 51 GELEQNRLWGAESTHRQLMGMMQSNLKKIHHEQGKLEGIGLLKVYIRESE 100
BSNT_04234___ 101 RQERLFIYELLPPLRPNEFFEDGMLNVFLYNRVGKTKYQQLKQFFTHPAI 150
::||:||||||||||||:|||||||||||||||||||||||:||:|||::
RBAM_026030__ 101 QKERMFIYELLPPLRPNDFFEDGMLNVFLYNRVGKTKYQQLRQFYTHPSV 150
BSNT_04234___ 151 SEDAKDITRPFNHAFESLQPSEWKLTSDMEETVRLAEGTEYTSVGQSPSY 200
...|::|||||||||.|.||||||:|.||||.::|.|..|..||||:|||
RBAM_026030__ 151 GAGAREITRPFNHAFASFQPSEWKMTPDMEEAMKLPEDYETASVGQAPSY 200
BSNT_04234___ 201 TITEDVFDFDLFLAGLSETMIPRKAMTQQVRDTIKKLSYLYGIDPLQMQN 250
|:||:||||:||:|||||||||||::||.||::||||||||||||:.||:
RBAM_026030__ 201 TVTEEVFDFELFMAGLSETMIPRKSITQDVRESIKKLSYLYGIDPISMQH 250
BSNT_04234___ 251 VVMSAIDERDVITTEALRKAASDWYQIERNGQLPDLVEKTQPVHLREGEK 300
|||:||:|:|.||.|||||||||||||||:|:||:|::|||||.||| .:
RBAM_026030__ 251 VVMTAINEQDTITAEALRKAASDWYQIERSGKLPELIDKTQPVTLRE-NR 299
BSNT_04234___ 301 PAEDDSLDGKLIALLEAISPKKLLQDIADGTEPSKADLKIIEEIMFEQKL 350
..:||||:|:|||.||.|||:|||||||||||||||||:||.:|||||||
RBAM_026030__ 300 TEKDDSLNGELIAQLETISPRKLLQDIADGTEPSKADLQIIADIMFEQKL 349
BSNT_04234___ 351 EPGVTNVLIYYVMLKTDMKLSKNYIQKIASHWARKKVKTVREAMKLAIEE 400
|||||||||||||||||||||||||||||:||||||||||||||||||||
RBAM_026030__ 350 EPGVTNVLIYYVMLKTDMKLSKNYIQKIAAHWARKKVKTVREAMKLAIEE 399
BSNT_04234___ 401 NRQYLEWAEGKTKSSKRNQKVIREEKLPDWMTEKETASDSESGQQKLHPQ 450
:||||:||:|||..:.|.:|.:||||.||||.|:||....| |..|..|
RBAM_026030__ 400 HRQYLDWADGKTNGAARGKKTVREEKRPDWMKEEETGKKQE--QPALSAQ 447
BSNT_04234___ 451 DLEEQKKKMMEEMQKLKKYSAY 472
|||||||||||||:||||||||
RBAM_026030__ 448 DLEEQKKKMMEEMKKLKKYSAY 469
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