Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04234 and RBAM_026030
See
Amino acid alignment /
Visit
BSNT_04234 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04234___dnaB.1.9828.seq
# -bsequence dna-align/RBAM_026030___dnaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04234___dnaB-RBAM_026030___dnaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04234___dnaB-RBAM_026030___dnaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04234___dnaB
# 2: RBAM_026030___dnaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1455
# Identity: 1101/1455 (75.7%)
# Similarity: 1101/1455 (75.7%)
# Gaps: 81/1455 ( 5.6%)
# Score: 4144.5
#
#
#=======================================
BSNT_04234___ 1 ATGGCTGACTATTGGAAAGATGTACTGCCTGTAGACCCGTATGTGGTTAA 50
|||||||||||||||||.||.|||.||||||||||.||.|||..|||.||
RBAM_026030__ 1 ATGGCTGACTATTGGAATGACGTATTGCCTGTAGATCCTTATACGGTCAA 50
BSNT_04234___ 51 AAGCAGATCGATGCTGCAGGATATTGACAGACAAATTATTACACAACTGT 100
||||.|.|||.|.||.||||||.|.||||||||..||.|.|||||.||||
RBAM_026030__ 51 AAGCCGTTCGCTTCTTCAGGATGTCGACAGACAGGTTTTGACACATCTGT 100
BSNT_04234___ 101 ACCAGCCCTTAATCGGCCCTGTTGCATTCTCTCTTTATATGACATTGTGG 150
|||||||..|.|||||..||.||||||||||.|||||||||||.||.|||
RBAM_026030__ 101 ACCAGCCGCTGATCGGTTCTTTTGCATTCTCCCTTTATATGACCTTATGG 150
BSNT_04234___ 151 GGAGAGCTTGAACAAAACCGTCTGTGGGGCGGAGAGTCCACACATAGACA 200
||.||||||||.||.|||||..|||||||.|..||.|||||.||.||.||
RBAM_026030__ 151 GGGGAGCTTGAGCAGAACCGCTTGTGGGGAGCGGAATCCACGCACAGGCA 200
BSNT_04234___ 201 GCTGATGGGGATGACACAGTCCAACTTAAAAACGATCCATCAGGAACAGG 250
|||||||||.||||..|||||.||.|||||||.|||.|||||.|||||||
RBAM_026030__ 201 GCTGATGGGCATGATGCAGTCAAATTTAAAAAAGATTCATCATGAACAGG 250
BSNT_04234___ 251 GGAAGCTCGAGGGCATCGGATTGCTGAAAGTATATATGAAAGAATCCGAG 300
|.|||||.||.||.|||||..||||||||||.|||||....||.||||||
RBAM_026030__ 251 GAAAGCTTGAAGGAATCGGGCTGCTGAAAGTGTATATCCGGGAGTCCGAG 300
BSNT_04234___ 301 CGGCAGGAGCGCCTCTTTATATATGAACTCCTTCCGCCGCTCAGACCAAA 350
|.|.|.|||||..|.|||||.|||||.||.||.||.||.||||||||.||
RBAM_026030__ 301 CAGAAAGAGCGGATGTTTATTTATGAGCTGCTGCCCCCACTCAGACCGAA 350
BSNT_04234___ 351 TGAATTTTTTGAAGACGGAATGCTGAATGTTTTTCTGTATAATAGAGTCG 400
|||.||||||||||||||.|||||||||||.|||||.|||||.|||||||
RBAM_026030__ 351 TGATTTTTTTGAAGACGGCATGCTGAATGTCTTTCTTTATAACAGAGTCG 400
BSNT_04234___ 401 GAAAAACGAAATATCAGCAATTAAAACAATTTTTTACGCACCCGGCTATT 450
|.|||||||||||.|||||..|.|.||||||||..|||||.|| |
RBAM_026030__ 401 GTAAAACGAAATACCAGCAGCTGAGACAATTTTACACGCATCC------T 444
BSNT_04234___ 451 TCAGAAGATGCG------AAGGACATTACGCGGCCGTTTAATCACGCGTT 494
||.|..|..||| |.|||.|||||.||.||||||||||||||.||
RBAM_026030__ 445 TCCGTCGGCGCGGGCGCAAGGGAAATTACCCGTCCGTTTAATCACGCCTT 494
BSNT_04234___ 495 TGAATCGCTGCAGCCGAGTGAATGGAAGCTCACATCTGATATGGAGGAAA 544
||..||..|.|||||||||||||||||..|.||..||||||||||.||..
RBAM_026030__ 495 TGCCTCTTTTCAGCCGAGTGAATGGAAAATGACGCCTGATATGGAAGAGG 544
BSNT_04234___ 545 CGGT-AAGACTTGCCGAGGGGACCGAGTAT------ACTTCTGTCGGACA 587
||.| ||| ||..||||| ||.||| .|.|||||||||||
RBAM_026030__ 545 CGATGAAG-CTCCCCGAG------GACTATGAGACGGCGTCTGTCGGACA 587
BSNT_04234___ 588 GTCTCCGTCCTACACCATAACGGAGGATGTGTTTGATTTTGATTTGTTTT 637
..|.||.|||||.||..|.||||||||.||.|||||||||||..|.||..
RBAM_026030__ 588 AGCGCCTTCCTATACGGTGACGGAGGAAGTATTTGATTTTGAGCTTTTCA 637
BSNT_04234___ 638 TAGCGGGACTTTCTGAGACGATGATACCGAGAAAAGCGATGACCCAGCAG 687
|.||||||||.||.||.||||||||||||.|.|||.|.||.||.|||.|.
RBAM_026030__ 638 TGGCGGGACTGTCAGAAACGATGATACCGCGTAAATCAATCACGCAGGAC 687
BSNT_04234___ 688 GTGCGGGACACAATCAAAAAGCTTTCTTATCTGTACGGAATTGACCCTTT 737
||||||||.|..||.|||||||||||.|||.|.||||||||.||.|||.|
RBAM_026030__ 688 GTGCGGGAGAGCATTAAAAAGCTTTCATATTTATACGGAATAGATCCTAT 737
BSNT_04234___ 738 GCAAATGCAAAATGTTGTGATGAGCGCAATTGATGAGC--GTGACGTCAT 785
....|||||..|.||.||.||||.|||||||.||||.| |..||| ||
RBAM_026030__ 738 CTCCATGCAGCACGTCGTCATGACCGCAATTAATGAACAGGATACG--AT 785
BSNT_04234___ 786 TACGACGGAGGCATTAAGAAAAGCGGCGAGCGACTGGTATCAAATTGAAA 835
.|||.|.||.||..|.||.||||||||.|||||||||||.||||||||||
RBAM_026030__ 786 AACGGCCGAAGCGCTGAGGAAAGCGGCCAGCGACTGGTACCAAATTGAAA 835
BSNT_04234___ 836 GAAACGGACAGCTGCCCGATTTGGTGGAAAAAACACAGCCGGTGCATCTG 885
|||.|||..||||.||.||..||.|.||.|||||||||||.|| ||.||
RBAM_026030__ 836 GAAGCGGTAAGCTTCCGGAACTGATTGATAAAACACAGCCTGT-CACCT- 883
BSNT_04234___ 886 CGTGAAGGCGA-AAAACCGG-CAGAA---GACGATTCTCTGGATGG-GAA 929
||| || |||||||| |.||| ||||||||..||.|.|| |||
RBAM_026030__ 884 --TGA----GAGAAAACCGGACGGAAAAGGACGATTCATTGAACGGCGAA 927
BSNT_04234___ 930 GCTGATTGCATTGCTGGAGGCGATTTCCCCGAAGAAGCTTCTGCAGGACA 979
||.||.|||..|||.|||.|.||.||.||||..||||||||.|||||||
RBAM_026030__ 928 -CTCATCGCACAGCTTGAGACCATATCACCGAGAAAGCTTCTTCAGGACA 976
BSNT_04234___ 980 TTGCTGACGGAACAGAGCCGTCAAAAGCTGATCTGAAGATCATAGAAGAA 1029
||||.|||||.||.||||||||||||||.||..||.||||.||.|..||.
RBAM_026030__ 977 TTGCGGACGGGACCGAGCCGTCAAAAGCCGACTTGCAGATTATCGCCGAT 1026
BSNT_04234___ 1030 ATTATGTTCGAACAGAAGCTCGAGCCAGGCGTCACAAATGTGTTAATTTA 1079
||||||||||||||.|||||.|||||.||||||||.||||||.|.|||||
RBAM_026030__ 1027 ATTATGTTCGAACAAAAGCTTGAGCCCGGCGTCACCAATGTGCTGATTTA 1076
BSNT_04234___ 1080 TTATGTCATGCTGAAAACCGACATGAAGCTGTCCAAAAACTATATCCAAA 1129
||||||||||||||||||.||.||||||||||||||||||||||||||||
RBAM_026030__ 1077 TTATGTCATGCTGAAAACGGATATGAAGCTGTCCAAAAACTATATCCAAA 1126
BSNT_04234___ 1130 AAATCGCTTCGCATTGGGCACGCAAAAAGGTAAAAACGGTCAGGGAAGCG 1179
|||||||..|.||.|||||..|.|||||.||.||||||||..|||||||.
RBAM_026030__ 1127 AAATCGCCGCCCACTGGGCCAGAAAAAAAGTCAAAACGGTACGGGAAGCA 1176
BSNT_04234___ 1180 ATGAAGCTCGCAATAGAAGAAAACCGCCAGTATCTTGAATGGGCTGAAGG 1229
||||||||||||||||||||..||.|.||.||||||||.|||||.||.||
RBAM_026030__ 1177 ATGAAGCTCGCAATAGAAGAGCACAGGCAATATCTTGATTGGGCGGACGG 1226
BSNT_04234___ 1230 AAAAACAAAGTCTTCG------------AAACGAAACCAAAAAGTGATTC 1267
.|||||||| |..|| ||| ||||| .|.|
RBAM_026030__ 1227 CAAAACAAA--CGGCGCGGCGCGCGGTAAAA--AAACC--------GTCC 1264
BSNT_04234___ 1268 GTGAAGAAAAGCTTCCTGATTGGATGACAGAAAAGGAAACAGCGTCTGAT 1317
|.||||||||||..|||||||||||||.||||.|.|||||.|.|
RBAM_026030__ 1265 GGGAAGAAAAGCGCCCTGATTGGATGAAAGAAGAAGAAACCGGG------ 1308
BSNT_04234___ 1318 TCAGAATC-CGGACAGCAGAAGCTGCATC--CGCAGGATTTGGAAGAACA 1364
.||||.| .|.|||||.| |||...|| ||||||||.|.||||||||
RBAM_026030__ 1309 -AAGAAACAAGAACAGCCG--GCTCTTTCCGCGCAGGATCTTGAAGAACA 1355
BSNT_04234___ 1365 GAAGAAAAAGATGATGGAAGAAATGCAAAAACTGAAAAAATACTCTGCCT 1414
|||||||||.|||||||||||||||.||||||||||||||||||||||||
RBAM_026030__ 1356 GAAGAAAAAAATGATGGAAGAAATGAAAAAACTGAAAAAATACTCTGCCT 1405
BSNT_04234___ 1415 ATTAA 1419
|||.|
RBAM_026030__ 1406 ATTGA 1410
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.