Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04227 and RBAM_026000

See DNA alignment / Visit BSNT_04227 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04227___ytxC.1.9828.seq
#    -bsequence pep-align/RBAM_026000___ytxC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04227___ytxC-RBAM_026000___ytxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04227___ytxC-RBAM_026000___ytxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04227___ytxC
# 2: RBAM_026000___ytxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     202/281 (71.9%)
# Similarity:   235/281 (83.6%)
# Gaps:           5/281 ( 1.8%)
# Score: 1058.0
# 
#
#=======================================

BSNT_04227___      1 MLEIIFEDDHDAAAFLHLIQHSDDRNNIIVHEGIRKIGIEKANPAFPIQR     50
                     |||:|||||||.||||||||.||||.:.||.|.|:|:||.::..||.:||
RBAM_026000__      1 MLEVIFEDDHDTAAFLHLIQQSDDRRHFIVREDIKKVGIARSETAFCVQR     50

BSNT_04227___     51 FMEPILVKFFLECKEDEHMLSLIEETYCFTDQDEQQQILQLAHSIIEGEA    100
                     |:|||||:||||||||||||||||:.|||||||||||||||||||:|||.
RBAM_026000__     51 FIEPILVRFFLECKEDEHMLSLIEDAYCFTDQDEQQQILQLAHSIMEGEL    100

BSNT_04227___    101 ADLPFEPLKLSRKQSILDELQTICLEEGVFYIRSFQTFRLGSYYKQLRDI    150
                     .|.||||.|..|.|.|.|.|:||.|:.|||.:|||||||||.||::||:.
RBAM_026000__    101 DDHPFEPKKEPRTQFISDALRTISLDGGVFSVRSFQTFRLGRYYERLREY    150

BSNT_04227___    151 TEAAIDEYKMEQEYQNFIQTLRDYVNAKQPRIKKVHIVHDGSFTLWELRY    200
                     .|||||||:||||||||||:|||||.:..||:|||.||||.:||||||||
RBAM_026000__    151 AEAAIDEYRMEQEYQNFIQSLRDYVTSNPPRMKKVRIVHDRAFTLWELRY    200

BSNT_04227___    201 VPEREKMKYIDRRFVRDHPMYIDSHLLAPLISIAPDEVVLYTDQPEHMMA    250
                     :.|||:.|||||||||:||||||||||||||||||:.|.||||:|||||:
RBAM_026000__    201 LSEREQKKYIDRRFVREHPMYIDSHLLAPLISIAPETVELYTDKPEHMMS    250

BSNT_04227___    251 RTIQNVFQERVEMLPLHAFTDAEIPVKQSKG    281
                     |||||||||||.:.||.||.     .::::|
RBAM_026000__    251 RTIQNVFQERVRLFPLGAFA-----AEKTEG    276


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