Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04223 and RBAM_025980

See DNA alignment / Visit BSNT_04223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04223___ysaA.1.9828.seq
#    -bsequence pep-align/RBAM_025980___ysaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04223___ysaA-RBAM_025980___ysaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04223___ysaA-RBAM_025980___ysaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04223___ysaA
# 2: RBAM_025980___ysaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     221/280 (78.9%)
# Similarity:   243/280 (86.8%)
# Gaps:          20/280 ( 7.1%)
# Score: 1204.0
# 
#
#=======================================

BSNT_04223___      1 MSLLAERFESEAEEKIMKAVFFDLDDTLLWDEKSVRTTFAETCLQAEKKY     50
                                     |||||||||||||||||||||||.||||||||||
RBAM_025980__      1 ----------------MKAVFFDLDDTLLWDEKSVRTTFRETCLQAEKKY     34

BSNT_04223___     51 GLDPEEFEAAVREAARELYMSYETYPYTVMIGINPFEGLWSNFSEPISEG    100
                     ||||..||.|||:|||||||||||||||||||||||||||:|||||:|||
RBAM_025980__     35 GLDPHTFEDAVRKAARELYMSYETYPYTVMIGINPFEGLWANFSEPVSEG     84

BSNT_04223___    101 FQKLNKIVPEYRRNAWTNGLKALGIDDPAYGEYLGEFFAAERRKRPFVYD    150
                     |::||:|.|||||||||||||::||||.||||||.||||||||:||:|||
RBAM_025980__     85 FKQLNRIAPEYRRNAWTNGLKSVGIDDAAYGEYLAEFFAAERRQRPYVYD    134

BSNT_04223___    151 ETFAVLDQLKGKYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    200
                     ||||||::|||.||||||||||||||||||||||||||||||||||||||
RBAM_025980__    135 ETFAVLEKLKGVYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    184

BSNT_04223___    201 KGKPDVSIFEHCLKLMNIENDDAIMVGDNLNTDILGASRAGIKTVWINRT    250
                     |||||.|||||||.|:|::.:||||||||||||||||.||||.|||:|||
RBAM_025980__    185 KGKPDASIFEHCLGLLNLKKEDAIMVGDNLNTDILGAKRAGITTVWVNRT    234

BSNT_04223___    251 DKKNETDVTPDYIISSLHDLFPILEK----    276
                     .|||:||:.|||:||.||:||.|:||    
RBAM_025980__    235 QKKNDTDIAPDYVISDLHELFAIIEKQKER    264


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