Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04217 and RBAM_025950

See DNA alignment / Visit BSNT_04217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04217___lrgA.1.9828.seq
#    -bsequence pep-align/RBAM_025950___ysbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04217___lrgA-RBAM_025950___ysbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04217___lrgA-RBAM_025950___ysbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04217___lrgA
# 2: RBAM_025950___ysbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     125/146 (85.6%)
# Similarity:   132/146 (90.4%)
# Gaps:           1/146 ( 0.7%)
# Score: 578.0
# 
#
#=======================================

BSNT_04217___      1 MSAKKVYGFLTQAFIFAVIMLVSNMIAAIVPIPIPASVVGLVLLFLLLCL     50
                     |||||||||||||||||||||:||.||||||||||||||||||||:||||
RBAM_025950__      1 MSAKKVYGFLTQAFIFAVIMLISNGIAAIVPIPIPASVVGLVLLFVLLCL     50

BSNT_04217___     51 KVIKLEQVETLGTSLTSLIGFLFVPSGISVMNSLGVMQQYGLQIVLVILL    100
                     |||||||||||||||||||||||||||||||||||||||||:||.|||||
RBAM_025950__     51 KVIKLEQVETLGTSLTSLIGFLFVPSGISVMNSLGVMQQYGVQIALVILL    100

BSNT_04217___    101 ATIILLGATGLFSQLILSLSGKRKTAADMKTKTVQSPQNNNELVHH    146
                     ||||||||||||||||||:|.||:.||..| :||:......|||.|
RBAM_025950__    101 ATIILLGATGLFSQLILSVSQKRQKAAPEK-QTVRRSNQEKELVQH    145


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