Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04216 and RBAM_025940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence pep-align/BSNT_04216___lrgB.1.9828.seq
# -bsequence pep-align/RBAM_025940___ysbB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04216___lrgB-RBAM_025940___ysbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04216___lrgB-RBAM_025940___ysbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04216___lrgB
# 2: RBAM_025940___ysbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 211/231 (91.3%)
# Similarity: 223/231 (96.5%)
# Gaps: 4/231 ( 1.7%)
# Score: 1066.0
#
#
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BSNT_04216___ 1 MESTMSPYFGIVVSLAAFGIGTFLFKKTKGFFLFTPLFVAMVLGIAFLKI 50
||||||||||||||||||:|||||:||||||||||||||||.|||:
RBAM_025940__ 1 ----MSPYFGIVVSLAAFGIGTYLFKKTRGFFLFTPLFVAMVLGILFLKL 46
BSNT_04216___ 51 GGFSYADYNNGGEIIKFFLEPATIAFAIPLYKQRDKLKKYWWQIMASIIA 100
|||||.||.:||:||||||||||||||||||||||||||||||||:|||.
RBAM_025940__ 47 GGFSYEDYKSGGDIIKFFLEPATIAFAIPLYKQRDKLKKYWWQIMSSIIV 96
BSNT_04216___ 101 GSICSVTIVYLLAKGIHLDSAVMKSMLPQAATTAIALPLSKGIGGISDIT 150
|||||||||||:|||||||:||||||||||||||||||||||||||:|||
RBAM_025940__ 97 GSICSVTIVYLIAKGIHLDAAVMKSMLPQAATTAIALPLSKGIGGITDIT 146
BSNT_04216___ 151 AFAVIFNAVIVYALGALFLKVFKVKNPISKGLALGTSGHALGVAVGIEMG 200
|||||||||||||:||||||:||||:||||||||||||||||||||||||
RBAM_025940__ 147 AFAVIFNAVIVYAMGALFLKLFKVKHPISKGLALGTSGHALGVAVGIEMG 196
BSNT_04216___ 201 EVEAAMASIAVVVVGVVTVLVIPVFVQLIGG 231
|||||||||||||||||||||||||||||||
RBAM_025940__ 197 EVEAAMASIAVVVVGVVTVLVIPVFVQLIGG 227
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