Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04210 and RBAM_025900

See DNA alignment / Visit BSNT_04210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:37
# Commandline: needle
#    -asequence pep-align/BSNT_04210___ysdA.1.9828.seq
#    -bsequence pep-align/RBAM_025900___ysdA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04210___ysdA-RBAM_025900___ysdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04210___ysdA-RBAM_025900___ysdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04210___ysdA
# 2: RBAM_025900___ysdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 91
# Identity:      53/91 (58.2%)
# Similarity:    68/91 (74.7%)
# Gaps:           5/91 ( 5.5%)
# Score: 299.5
# 
#
#=======================================

BSNT_04210___      1 MIIAAYLLLINLCGFWVMGIDKRKAQQHKWRISEDRLWLIAIVFGALGVW     50
                     |.:..|.:|||..|||:||.|||:|:.|:|||||.|:||.|::||:||||
RBAM_025900__      1 MALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVW     50

BSNT_04210___     51 LGMQTFRHKTKHASFKYGVPLLLVIEAILIAIY--YSPFDL     89
                     :||:||||||||.||.||||||.:.||.|:.:|  |..   
RBAM_025900__     51 IGMRTFRHKTKHKSFLYGVPLLFLTEAALVLMYLMYKT---     88


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