Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04206 and RBAM_025880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_04206___ysdC.1.9828.seq
# -bsequence pep-align/RBAM_025880___ysdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04206___ysdC-RBAM_025880___ysdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04206___ysdC-RBAM_025880___ysdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04206___ysdC
# 2: RBAM_025880___ysdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 325/361 (90.0%)
# Similarity: 349/361 (96.7%)
# Gaps: 0/361 ( 0.0%)
# Score: 1711.0
#
#
#=======================================
BSNT_04206___ 1 MAKLDETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTDRLGSL 50
|.||||||||||.|||||||||||||||||||||||||||:|||||||||
RBAM_025880__ 1 MTKLDETLTMLKALTDAKGIPGNEREVRQVMKSYIEPFADDVTTDRLGSL 50
BSNT_04206___ 51 IAKKTGAENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLA 100
||||||.||||||||:||||||||||||||||||:|||||||||:|||||
RBAM_025880__ 51 IAKKTGKENGPKIMISGHLDEVGFMVTQITDKGFLRFQTVGGWWSQVMLA 100
BSNT_04206___ 101 QRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEA 150
||||:|||||:|||:|||||||||.|:||||:.:||:|||||||||||||
RBAM_025880__ 101 QRVTVVTKKGDITGIIGSKPPHILPPDARKKAADIKEMFIDIGASSREEA 150
BSNT_04206___ 151 LEWGILPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT 200
:|||:||||.|||:||||||||||.|||||||||||||||||||:||:|:
RBAM_025880__ 151 MEWGVLPGDQIVPYFEFTVMNNEKHLLAKAWDNRIGCAIAIDVLKNLKNS 200
BSNT_04206___ 201 DHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEK 250
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_025880__ 201 DHPNEVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEK 250
BSNT_04206___ 251 EAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFDAIAGGGT 300
|||||:|:|||||:|||||||||||||.||.||||||||||||:||||||
RBAM_025880__ 251 EAQSKIGEGPQIILYDASMVSHKGLRDLVVNTAEEAGIPYQFDSIAGGGT 300
BSNT_04206___ 301 DSGAIHLTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350
|||:|||||||||||||||||||||||||:||||||||.|||||||||||
RBAM_025880__ 301 DSGSIHLTANGVPALSITIATRYIHTHAAILHRDDYENTVKLITEVIKKL 350
BSNT_04206___ 351 DRKTVDEITYQ 361
||:|||.||||
RBAM_025880__ 351 DRETVDRITYQ 361
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