Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04193 and RBAM_025770

See DNA alignment / Visit BSNT_04193 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_04193___cstA.1.9828.seq
#    -bsequence pep-align/RBAM_025770___cstA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04193___cstA-RBAM_025770___cstA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04193___cstA-RBAM_025770___cstA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04193___cstA
# 2: RBAM_025770___cstA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 598
# Identity:     542/598 (90.6%)
# Similarity:   574/598 (96.0%)
# Gaps:           0/598 ( 0.0%)
# Score: 2844.0
# 
#
#=======================================

BSNT_04193___      1 MNAVTIVIASMCILAIAYRLYGTFMMVKVLKVNDDKPTPAHVLEDGKDYV     50
                     |||:||||||:||||||||||||||||||||:||..||||||||||||||
RBAM_025770__      1 MNAITIVIASICILAIAYRLYGTFMMVKVLKINDQTPTPAHVLEDGKDYV     50

BSNT_04193___     51 PTNKWVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVH    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025770__     51 PTNKWVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVH    100

BSNT_04193___    101 DIVVLFASMHKNGKSLSEVAKAELGPVAGFCTGLSMLFIITITMAGLSMV    150
                     |||||||||.||||:||||||.||||||||||||||||||||||||||||
RBAM_025770__    101 DIVVLFASMRKNGKTLSEVAKEELGPVAGFCTGLSMLFIITITMAGLSMV    150

BSNT_04193___    151 VLHALERNPWGTFAVGITIPIAMGVGLFYKKTGNLKLASTVGFLFLMAGV    200
                     ||||||:||||||||||||||||||||:||||||||||||||||.|||||
RBAM_025770__    151 VLHALEKNPWGTFAVGITIPIAMGVGLYYKKTGNLKLASTVGFLLLMAGV    200

BSNT_04193___    201 FIGPWVQTTALGDFLTLDTKTLAIALPVYAFFAAALPVWLLLAPRDYLSS    250
                     .|||.:|||||||.||||.||||:||||||||||||||||||||||||||
RBAM_025770__    201 VIGPRLQTTALGDMLTLDAKTLAVALPVYAFFAAALPVWLLLAPRDYLSS    250

BSNT_04193___    251 FMKIGVFIALIVGVFVVNPSIPFPAFTEFVKGGGPVLAGPVWPFISITIA    300
                     |||||||.|||.|||.|||:|.|||.|||:.|||||:|||||||||||||
RBAM_025770__    251 FMKIGVFAALIAGVFFVNPAIKFPAVTEFIHGGGPVIAGPVWPFISITIA    300

BSNT_04193___    301 CGAISGFHAFVGSGTTPKMLNKWSDMKPVAFGAMLVECLVGIMALIAATA    350
                     ||||||||||||||||||||:||||:||||||||||||||||||||||.|
RBAM_025770__    301 CGAISGFHAFVGSGTTPKMLDKWSDIKPVAFGAMLVECLVGIMALIAAAA    350

BSNT_04193___    351 LQPADYFAINSTPEVFRTLGMNVIHLPELSREIGLDLEGRTGGAVTLAVG    400
                     |:||||||||||||:||||||||:||||||:||||.||||||||||||||
RBAM_025770__    351 LEPADYFAINSTPEIFRTLGMNVVHLPELSKEIGLSLEGRTGGAVTLAVG    400

BSNT_04193___    401 MTYIFTGMPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQDFFG    450
                     ||||||.:||||||||||||||||||||||||||||||||||||||:|||
RBAM_025770__    401 MTYIFTEIPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQEFFG    450

BSNT_04193___    451 EVYKPLKKTDWIPGSVFASALACLMWGYLLYSGDIGSIWALFGVSNQLMA    500
                     |||||||||||:|||:|:||||||:||||||||||.||||||||||||||
RBAM_025770__    451 EVYKPLKKTDWLPGSIFSSALACLLWGYLLYSGDISSIWALFGVSNQLMA    500

BSNT_04193___    501 SVGLIIGATIVLKIADKRRYILTCLIPLAYLYVTVNYAGYWMVRNVYLNP    550
                     |||||||||:||||||||||:|||||||||||||||||||||||.|||||
RBAM_025770__    501 SVGLIIGATVVLKIADKRRYMLTCLIPLAYLYVTVNYAGYWMVRYVYLNP    550

BSNT_04193___    551 EAAGYSVLNGVLSIIMLVLGFIIIVAAVKKWAQMWKDPSLRMEASIPV    598
                     |||||:|||||||||||:||.:||:|||||||.:|:|||.|:|||||.
RBAM_025770__    551 EAAGYNVLNGVLSIIMLILGLVIIIAAVKKWANVWRDPSARLEASIPG    598


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