Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04189 and RBAM_025760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence pep-align/BSNT_04189___ysfD.1.9828.seq
# -bsequence pep-align/RBAM_025760___ysfD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04189___ysfD-RBAM_025760___ysfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04189___ysfD-RBAM_025760___ysfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04189___ysfD
# 2: RBAM_025760___ysfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 352/444 (79.3%)
# Similarity: 387/444 (87.2%)
# Gaps: 2/444 ( 0.5%)
# Score: 1862.0
#
#
#=======================================
BSNT_04189___ 1 MTTEKEMKQIQDKFKERMDEGELLNCMRCGFCLPSCPTYIESGFHETHSP 50
|||.||.|.||.:||.||||||||||||||||||||||||||||.|:|||
RBAM_025760__ 1 MTTAKEQKHIQTEFKNRMDEGELLNCMRCGFCLPSCPTYIESGFQESHSP 50
BSNT_04189___ 51 RGRIALMKAVADGMIEPDEDVERSLSLCLGCRACEPVCPSGVKYGQLLEE 100
||||||||||.||:|||||||||||||||||||||||||:||.|||||||
RBAM_025760__ 51 RGRIALMKAVTDGLIEPDEDVERSLSLCLGCRACEPVCPAGVNYGQLLEE 100
BSNT_04189___ 101 ARDIIHQNKKHSLGARVMRKAAFHELFPHQNRMRSAVSLIGLYQRSGLQT 150
|||||||||||..|.|::|||||..||||||||::||:|:|:||||||||
RBAM_025760__ 101 ARDIIHQNKKHKPGVRLLRKAAFTGLFPHQNRMQTAVNLLGIYQRSGLQT 150
BSNT_04189___ 151 AVRKTGMLRVLPEHLRTMEAVLPDVPKSKDMKHRPRFLPSIGPMKKRVAF 200
|||||||||||||||||||.|||.|||.||||.|||||.:.||::||.||
RBAM_025760__ 151 AVRKTGMLRVLPEHLRTMEQVLPPVPKRKDMKERPRFLHAAGPVQKRAAF 200
BSNT_04189___ 201 FSGCLMDTMFLPTNNATLKLLQLAGCDIVIPPEQACCGALHGHSGEKNTG 250
|||||||||||.||:||..|||.|||:|.:|..||||||||||||||..|
RBAM_025760__ 201 FSGCLMDTMFLATNHATTALLQAAGCEIAVPDGQACCGALHGHSGEKEMG 250
BSNT_04189___ 251 KELAKQNIAAFEALDVDAVITNAGGCGAFLTEYNHLLKDDPEWSERAAAF 300
|||||:|||||||||.|.:|||||||||||.||.|||||:|.|:|||..|
RBAM_025760__ 251 KELAKRNIAAFEALDADYIITNAGGCGAFLQEYPHLLKDEPGWAERAEQF 300
BSNT_04189___ 301 VQKLKDFSSVLVELDFHQMDLALETPQVVTYQDSCHLRNVMHTSLAPRQL 350
|:||||||||||:|.|||.:|..::|.:||||||||||||||||..||.|
RBAM_025760__ 301 VRKLKDFSSVLVDLKFHQKNLRAQSPHIVTYQDSCHLRNVMHTSEEPRTL 350
BSNT_04189___ 351 LKSIKGAEFKEMEKADSCCGSAGIYNIVEAEMSMRILDSKMAAVKATEAI 400
||||||||::|||||||||||||||||.|:||||:||||||.|...|||.
RBAM_025760__ 351 LKSIKGAEYREMEKADSCCGSAGIYNITESEMSMKILDSKMKAAGKTEAA 400
BSNT_04189___ 401 LIVTANPGCLLQMKLGIEREGLSGKVRAVHLADLLLEAAGHKPS 444
:||||||||||||:|||.||||:|:||||||||.|||||...
RBAM_025760__ 401 VIVTANPGCLLQMQLGILREGLTGRVRAVHLADYLLEAADLS-- 442
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