Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04188 and RBAM_025750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence pep-align/BSNT_04188___ysfC.1.9828.seq
# -bsequence pep-align/RBAM_025750___ysfC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04188___ysfC-RBAM_025750___ysfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04188___ysfC-RBAM_025750___ysfC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04188___ysfC
# 2: RBAM_025750___ysfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity: 395/470 (84.0%)
# Similarity: 431/470 (91.7%)
# Gaps: 0/470 ( 0.0%)
# Score: 2027.0
#
#
#=======================================
BSNT_04188___ 1 MITKDVKEQLIRVSGPENFDDSNAGRLVYSYDATPQYQSMPDAVIAPRNT 50
||:::.||..||..|.||:|||.||||||||||.||.|:|||||||||:.
RBAM_025750__ 1 MISREAKEAFIRTVGKENYDDSAAGRLVYSYDAAPQLQAMPDAVIAPRSA 50
BSNT_04188___ 51 EEVSRILTICSEHRVPIVPRGSGTNLCGGTCPTEGGLVLLFKHMNQILEI 100
::|||||||||.|.:|||||||||||||||||:||||||||||||:||||
RBAM_025750__ 51 DDVSRILTICSRHDIPIVPRGSGTNLCGGTCPSEGGLVLLFKHMNRILEI 100
BSNT_04188___ 101 DEENLTATVQPGVITLDMIRAVESKGLFYPPDPSSMKISTIGGNINENSG 150
|||||||||||||||.|||||||.||||||||||||||||||||||||||
RBAM_025750__ 101 DEENLTATVQPGVITQDMIRAVEQKGLFYPPDPSSMKISTIGGNINENSG 150
BSNT_04188___ 151 GLRGLKYGVTRDYVIGLEVVLANGDIIRTGGKLAKDVAGYDLTRLFVGSE 200
||||||||||||||:|||.|||:||||||||||.||||||||||||||:|
RBAM_025750__ 151 GLRGLKYGVTRDYVLGLEAVLASGDIIRTGGKLTKDVAGYDLTRLFVGAE 200
BSNT_04188___ 201 GTLGIVTEAIVKLVPKPETKKTLLALYENIDAAAQTVSDIIAAKIIPATL 250
||||:||||.:|||||||||||||||||:|:|||::||.|||.|||||||
RBAM_025750__ 201 GTLGVVTEATLKLVPKPETKKTLLALYEHIEAAAESVSAIIAEKIIPATL 250
BSNT_04188___ 251 EFLDQPTLLVIEDYAKIGLPTNAKAVLLIEQDGPLEIVARDMEKIEAICK 300
||||||||.||||||||||||:|||||||||||.:|.|.|||||||||||
RBAM_025750__ 251 EFLDQPTLQVIEDYAKIGLPTDAKAVLLIEQDGDIETVRRDMEKIEAICK 300
BSNT_04188___ 301 KGDAVSVQTAQTEEEAFALTEARRSALSALARLKPTTILEDATVPRSEIA 350
.|.|||||||:||||||||||||||||||||||||||||||||||||:||
RBAM_025750__ 301 NGAAVSVQTAETEEEAFALTEARRSALSALARLKPTTILEDATVPRSQIA 350
BSNT_04188___ 351 NMVKAINDIAAKYDISICTFGHAGDGNLHPTCTTDIRNEDEMERVEQAFA 400
:||||||:||..|.:|||||||||||||||||||||||.:||||||:|||
RBAM_025750__ 351 SMVKAINEIAETYGLSICTFGHAGDGNLHPTCTTDIRNTEEMERVEKAFA 400
BSNT_04188___ 401 EIFEKAIELGGTITGEHGVGAMKAPYLEMKLKKEGIDAMKALKAAFDPRN 450
.|||||||||||||||||||.:||||||||||.|||.||||:|.|.||:|
RBAM_025750__ 401 AIFEKAIELGGTITGEHGVGIVKAPYLEMKLKTEGITAMKAIKQALDPKN 450
BSNT_04188___ 451 ILNPGKVFAKDARKRVVAER 470
:|||||:||..:|||||..:
RBAM_025750__ 451 LLNPGKIFANSSRKRVVVMK 470
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