Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04183 and RBAM_025730

See DNA alignment / Visit BSNT_04183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_04183___sspI.1.9828.seq
#    -bsequence pep-align/RBAM_025730___sspI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: RBAM_025730___sspI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      66/71 (93.0%)
# Similarity:    71/71 (100.0%)
# Gaps:           0/71 ( 0.0%)
# Score: 344.0
# 
#
#=======================================

BSNT_04183___      1 MDLNLRHAVIANVTGNNQEQLEHTIVDAIQSGEEKMLPGLGVLFEVIWQH     50
                     ||||||:|||||||||||:|||||||||||||||||||||||||||:|||
RBAM_025730__      1 MDLNLRNAVIANVTGNNQDQLEHTIVDAIQSGEEKMLPGLGVLFEVLWQH     50

BSNT_04183___     51 ASESEKNEMLKTLEGGLKPAE     71
                     ||:|||||||||||||||||:
RBAM_025730__     51 ASDSEKNEMLKTLEGGLKPAQ     71


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