Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04183 and RBAM_025730

See Amino acid alignment / Visit BSNT_04183 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence dna-align/BSNT_04183___sspI.1.9828.seq
#    -bsequence dna-align/RBAM_025730___sspI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: RBAM_025730___sspI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity:     183/216 (84.7%)
# Similarity:   183/216 (84.7%)
# Gaps:           0/216 ( 0.0%)
# Score: 783.0
# 
#
#=======================================

BSNT_04183___      1 ATGGATCTTAATTTACGTCATGCCGTCATTGCCAATGTCACCGGCAATAA     50
                     |||||.|||||||||||..|.|||||.|||||||||||.|||||||||||
RBAM_025730__      1 ATGGACCTTAATTTACGCAACGCCGTTATTGCCAATGTAACCGGCAATAA     50

BSNT_04183___     51 TCAGGAGCAGCTTGAGCATACAATCGTAGATGCGATTCAAAGCGGTGAAG    100
                     .|||||.|||||.||||||||.|||||.||.||.||.|||||||||||||
RBAM_025730__     51 CCAGGATCAGCTGGAGCATACTATCGTTGACGCCATCCAAAGCGGTGAAG    100

BSNT_04183___    101 AAAAAATGCTTCCAGGGCTCGGCGTTTTATTCGAAGTCATTTGGCAGCAC    150
                     |||||||||||||.||.||||||||.|||||||||||..||||||||||.
RBAM_025730__    101 AAAAAATGCTTCCGGGCCTCGGCGTCTTATTCGAAGTTCTTTGGCAGCAT    150

BSNT_04183___    151 GCATCCGAAAGTGAGAAAAACGAAATGCTGAAAACGCTTGAAGGCGGATT    200
                     ||.||.||....||.|||||.||||||||.|||||.||||||||||||||
RBAM_025730__    151 GCGTCGGACTCAGAAAAAAATGAAATGCTCAAAACACTTGAAGGCGGATT    200

BSNT_04183___    201 AAAACCCGCCGAATAA    216
                     ||||||.||..|||||
RBAM_025730__    201 AAAACCTGCGCAATAA    216


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