Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04183 and RBAM_025730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence dna-align/BSNT_04183___sspI.1.9828.seq
# -bsequence dna-align/RBAM_025730___sspI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04183___sspI-RBAM_025730___sspI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: RBAM_025730___sspI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 183/216 (84.7%)
# Similarity: 183/216 (84.7%)
# Gaps: 0/216 ( 0.0%)
# Score: 783.0
#
#
#=======================================
BSNT_04183___ 1 ATGGATCTTAATTTACGTCATGCCGTCATTGCCAATGTCACCGGCAATAA 50
|||||.|||||||||||..|.|||||.|||||||||||.|||||||||||
RBAM_025730__ 1 ATGGACCTTAATTTACGCAACGCCGTTATTGCCAATGTAACCGGCAATAA 50
BSNT_04183___ 51 TCAGGAGCAGCTTGAGCATACAATCGTAGATGCGATTCAAAGCGGTGAAG 100
.|||||.|||||.||||||||.|||||.||.||.||.|||||||||||||
RBAM_025730__ 51 CCAGGATCAGCTGGAGCATACTATCGTTGACGCCATCCAAAGCGGTGAAG 100
BSNT_04183___ 101 AAAAAATGCTTCCAGGGCTCGGCGTTTTATTCGAAGTCATTTGGCAGCAC 150
|||||||||||||.||.||||||||.|||||||||||..||||||||||.
RBAM_025730__ 101 AAAAAATGCTTCCGGGCCTCGGCGTCTTATTCGAAGTTCTTTGGCAGCAT 150
BSNT_04183___ 151 GCATCCGAAAGTGAGAAAAACGAAATGCTGAAAACGCTTGAAGGCGGATT 200
||.||.||....||.|||||.||||||||.|||||.||||||||||||||
RBAM_025730__ 151 GCGTCGGACTCAGAAAAAAATGAAATGCTCAAAACACTTGAAGGCGGATT 200
BSNT_04183___ 201 AAAACCCGCCGAATAA 216
||||||.||..|||||
RBAM_025730__ 201 AAAACCTGCGCAATAA 216
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