Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04174 and RBAM_025680

See DNA alignment / Visit BSNT_04174 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04174___yshA.1.9828.seq
#    -bsequence pep-align/RBAM_025680___yshA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04174___yshA-RBAM_025680___yshA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04174___yshA-RBAM_025680___yshA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04174___yshA
# 2: RBAM_025680___yshA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 85
# Identity:      76/85 (89.4%)
# Similarity:    83/85 (97.6%)
# Gaps:           0/85 ( 0.0%)
# Score: 397.0
# 
#
#=======================================

BSNT_04174___      1 MSDGKKTKTTVDIYGQHFTIVGEESRAHMRYVAGIVDDKMREINEKNPYL     50
                     |||||||||||:||||||||:||||:||||:|||:|||||||||||||||
RBAM_025680__      1 MSDGKKTKTTVNIYGQHFTIIGEESKAHMRHVAGVVDDKMREINEKNPYL     50

BSNT_04174___     51 DINKLAVLTAVNVVHDYVKLQEKCEKLERQLKEKD     85
                     |||||||||||||||||:|||||.|.||||||||:
RBAM_025680__     51 DINKLAVLTAVNVVHDYMKLQEKYEILERQLKEKE     85


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