Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04168 and RBAM_025620

See DNA alignment / Visit BSNT_04168 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04168___lcfA.1.9828.seq
#    -bsequence pep-align/RBAM_025620___lcfA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04168___lcfA-RBAM_025620___lcfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04168___lcfA-RBAM_025620___lcfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04168___lcfA
# 2: RBAM_025620___lcfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 562
# Identity:     448/562 (79.7%)
# Similarity:   500/562 (89.0%)
# Gaps:           2/562 ( 0.4%)
# Score: 2383.0
# 
#
#=======================================

BSNT_04168___      1 MQSQKPWLAEYPNDIPHELPLPNKTLQSILTDSAARFPDKTAISFYGKKL     50
                     |||:||||::||.:|||||...::||.|.||:|||:||:.|||.|.||||
RBAM_025620__      1 MQSEKPWLSQYPEEIPHELEFTDQTLPSNLTNSAAQFPNHTAIYFLGKKL     50

BSNT_04168___     51 TFHDILTDALKLAAFLQGNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGI    100
                     ||.|:|||:|||||||:..||:||||.|:|||||||:||::|||||||||
RBAM_025620__     51 TFQDVLTDSLKLAAFLRKTGLKKGDRAAIMLPNCPQSVIAFYGVLFAGGI    100

BSNT_04168___    101 VVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILIT    150
                     |||||||||||||||||:|:...||||||:||||.|||||||:|::|:.|
RBAM_025620__    101 VVQTNPLYTEHELEYQLKDSAPRVIITLDMLFPKVIKMKTLSLVERIITT    150

BSNT_04168___    151 SVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASSMKQEKTELLTIP    200
                     |:||:||||||:||.|||||:||||:|....||..|..:|.|:.|.....
RBAM_025620__    151 SIKDFLPFPKNMLYTLTQKQQVHIDYDGCEQIHKLADILKNERAEEAEPF    200

BSNT_04168___    201 KIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAE    250
                     .|||.||||||||||||||.||||||||:||.|||||||||||.:|:|||
RBAM_025620__    201 DIDPAHDIAVLQYTGGTTGYPKGVMLTHRNIQANTEMCAAWMYKMKKGAE    250

BSNT_04168___    251 KVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKHKPTL    300
                     |||||||||||||||||:|:||..|.||||||||:||:|||.||:.|||:
RBAM_025620__    251 KVLGIVPFFHVYGLTAVLNFSIMQGCEMILLPKFNPLDTLKTIDRLKPTV    300

BSNT_04168___    301 FPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEKVTGGK    350
                     |||||||||||||||||..||||||:||.|||||||||||||||||||||
RBAM_025620__    301 FPGAPTIYIGLLHHPELNKYDLSSIESCPSGSAALPVEVKQKFEKVTGGK    350

BSNT_04168___    351 LVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAP    400
                     |||||||||||||||:|||||||||||||||||:|||.|||||.|.||.|
RBAM_025620__    351 LVEGYGLSEASPVTHSNFIWGKNKPGSIGCPWPNTDAGIYSEEKGGLAGP    400

BSNT_04168___    401 YEHGEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMDEEGFFYIA    450
                     |||||:||||||||||||||.||||.|:||||||||||||||||||||||
RBAM_025620__    401 YEHGELIVKGPQVMKGYWNKQEETARVIRDGWLFTGDMGYMDEEGFFYIA    450

BSNT_04168___    451 DRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFV    500
                     ||||||||||||||||||||||||||||:||||||||||||||||||||:
RBAM_025620__    451 DRKKDIIIAGGYNIYPREVEEALYEHEAVQEIVVAGVPDSYRGETVKAFI    500

BSNT_04168___    501 VLKKGAKADAEELDAFARSRLAPYKVPKAYDFRKELPKTAVGKILRRRLL    550
                     ||||||:|||:|||||||.|||||||||.|:||||||||||||||||||:
RBAM_025620__    501 VLKKGAEADADELDAFARERLAPYKVPKLYEFRKELPKTAVGKILRRRLV    550

BSNT_04168___    551 EEETENHHIK--    560
                     |||..:...|  
RBAM_025620__    551 EEEDASCENKVP    562


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