Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04166 and RBAM_025600

See DNA alignment / Visit BSNT_04166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04166___ysiB.1.9828.seq
#    -bsequence pep-align/RBAM_025600___ysiB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04166___ysiB-RBAM_025600___ysiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04166___ysiB-RBAM_025600___ysiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04166___ysiB
# 2: RBAM_025600___ysiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     200/259 (77.2%)
# Similarity:   233/259 (90.0%)
# Gaps:           1/259 ( 0.4%)
# Score: 1033.0
# 
#
#=======================================

BSNT_04166___      1 MNAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSII     50
                     ||::|:||:|.|||:||::.||||||..:|:|||...|:||||..|||||
RBAM_025600__      1 MNSLSMAVEQSVAVITINHQPANALSGAVLDELSGLFDRCETDDSVRSII     50

BSNT_04166___     51 IHGEGRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAA    100
                     |.|||:||||||||||||||:..|.||.:|::|||||||||.||||:|||
RBAM_025600__     51 IRGEGKFFSAGADIKEFTSLEKLEQSSAMADKGQQLMERIEGFPKPVIAA    100

BSNT_04166___    101 IHGAALGGGLELAMACHIRIATVDAKLGLPELNLGIIPGFAGTQRLPRYV    150
                     ||||||||||||||||||||||:|||||||||||||||||||||||||||
RBAM_025600__    101 IHGAALGGGLELAMACHIRIATLDAKLGLPELNLGIIPGFAGTQRLPRYV    150

BSNT_04166___    151 GTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEK    200
                     |||||||:||:.||::|:|||.||||::||:.|.|:::|||.||.|||||
RBAM_025600__    151 GTAKALEMIGTSEPVTGEEALSLGLVTVGAEHEEELLKKAKTLAGKFAEK    200

BSNT_04166___    201 SPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEK    250
                     |||::|||||||||||:|||:|.||||||||||||.|:||||||||||||
RBAM_025600__    201 SPQSMASLLELLYSNKIYSYDGGLKLEAKRFGEAFASDDAKEGIQAFLEK    250

BSNT_04166___    251 RKPQFKGE-    258
                     |||||.|. 
RBAM_025600__    251 RKPQFGGRR    259


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