Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04158 and RBAM_025560

See DNA alignment / Visit BSNT_04158 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence pep-align/BSNT_04158___trxA.1.9828.seq
#    -bsequence pep-align/RBAM_025560___trxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04158___trxA-RBAM_025560___trxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04158___trxA-RBAM_025560___trxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04158___trxA
# 2: RBAM_025560___trxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:     103/104 (99.0%)
# Similarity:   104/104 (100.0%)
# Gaps:           0/104 ( 0.0%)
# Score: 531.0
# 
#
#=======================================

BSNT_04158___      1 MAIVKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025560__      1 MAIVKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKL     50

BSNT_04158___     51 KIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_025560__     51 KIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALEELV    100

BSNT_04158___    101 NKHL    104
                     ||||
RBAM_025560__    101 NKHL    104


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