Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04158 and RBAM_025560

See Amino acid alignment / Visit BSNT_04158 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence dna-align/BSNT_04158___trxA.1.9828.seq
#    -bsequence dna-align/RBAM_025560___trxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04158___trxA-RBAM_025560___trxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04158___trxA-RBAM_025560___trxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04158___trxA
# 2: RBAM_025560___trxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     284/315 (90.2%)
# Similarity:   284/315 (90.2%)
# Gaps:           0/315 ( 0.0%)
# Score: 1296.0
# 
#
#=======================================

BSNT_04158___      1 ATGGCTATCGTAAAAGCAACTGATCAATCTTTCTCAGCTGAAACAAGCGA     50
                     |||||||||||||||||||||||||||||.|||||||||||||||||.||
RBAM_025560__      1 ATGGCTATCGTAAAAGCAACTGATCAATCGTTCTCAGCTGAAACAAGTGA     50

BSNT_04158___     51 AGGCGTCGTACTGGCAGACTTCTGGGCTCCTTGGTGCGGACCTTGTAAAA    100
                     |||.||||||.||||.||.|||||||||||||||||||||||||||||||
RBAM_025560__     51 AGGTGTCGTATTGGCTGATTTCTGGGCTCCTTGGTGCGGACCTTGTAAAA    100

BSNT_04158___    101 TGATTGCACCTGTTCTTGAAGAATTGGATCAAGAAATGGGAGACAAACTG    150
                     ||||.||.||.|||||||||||..|.||||||||||||||||||||||||
RBAM_025560__    101 TGATCGCGCCCGTTCTTGAAGAGCTTGATCAAGAAATGGGAGACAAACTG    150

BSNT_04158___    151 AAAATCGTAAAAATCGATGTAGACGAAAACCAAGAAACTGCCGGAAAATA    200
                     ||||||||.||||||||.||.||.||||||||||||||||||||.|||||
RBAM_025560__    151 AAAATCGTCAAAATCGACGTGGATGAAAACCAAGAAACTGCCGGTAAATA    200

BSNT_04158___    201 CGGCGTTATGAGCATCCCGACTCTTCTTGTGTTAAAAGACGGCGAAGTAG    250
                     ||||||.||||||||||||||.|||||.||.||.||||||||.|||||.|
RBAM_025560__    201 CGGCGTCATGAGCATCCCGACACTTCTCGTATTGAAAGACGGAGAAGTCG    250

BSNT_04158___    251 TTGAAACTTCAGTCGGCTTCAAACCAAAAGAAGCGCTTCAAGAGCTTGTA    300
                     |||||||.||.|||||.||||||||.||||||||.|||.|||||||||||
RBAM_025560__    251 TTGAAACATCTGTCGGTTTCAAACCGAAAGAAGCTCTTGAAGAGCTTGTA    300

BSNT_04158___    301 AACAAACATCTTTAA    315
                     |||||||||||.|||
RBAM_025560__    301 AACAAACATCTGTAA    315


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