Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04156 and RBAM_025550

See DNA alignment / Visit BSNT_04156 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence pep-align/BSNT_04156___uvrC.1.9828.seq
#    -bsequence pep-align/RBAM_025550___uvrC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04156___uvrC-RBAM_025550___uvrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04156___uvrC-RBAM_025550___uvrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04156___uvrC
# 2: RBAM_025550___uvrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 590
# Identity:     552/590 (93.6%)
# Similarity:   578/590 (98.0%)
# Gaps:           0/590 ( 0.0%)
# Score: 2892.0
# 
#
#=======================================

BSNT_04156___      1 MNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHD     50
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_025550__      1 MNKQLKEKLALLPDQPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHD     50

BSNT_04156___     51 AKTQRLVTEIEDFEYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYP    100
                     |||||||:||||||||||||||||||||||||||:|||||||||||||||
RBAM_025550__     51 AKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKYNVMLKDDKTYP    100

BSNT_04156___    101 FIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRK    150
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025550__    101 FIKITHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRK    150

BSNT_04156___    151 CSKLPDRVCLYYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKK    200
                     ||||||||||||||||||||||||||||||||:||.|||||:||:||:||
RBAM_025550__    151 CSKLPDRVCLYYHLGQCLAPCVKDISEETNREIVEDITRFLKGGHNEIKK    200

BSNT_04156___    201 ELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMNDLVDRDVFAY    250
                     |||.||.||||.||||||||.|||:|||||||||||||||||:|||||||
RBAM_025550__    201 ELEAKMAEAAEKLEFERAKEFRDQLAHIESTMEKQKMTMNDLLDRDVFAY    250

BSNT_04156___    251 AYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNH    300
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_025550__    251 AYDKGWMCVQVFFIRQGKLIERDVSMFPMYQEADEEFLTFIGQFYSKNNH    300

BSNT_04156___    301 FLPKEILVPDSVDQSMIEQLLETNVHQPKKGPKKELLMLAHKNAKIALKE    350
                     |||||||||||||:.||.:||||.|||||||||||||:||||||||||:|
RBAM_025550__    301 FLPKEILVPDSVDRDMITELLETAVHQPKKGPKKELLLLAHKNAKIALRE    350

BSNT_04156___    351 KFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV    400
                     |||||||||||||||.::||||||||||||||||||||||||||||||||
RBAM_025550__    351 KFSLIERDEERSIGAAERLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV    400

BSNT_04156___    401 FIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLI    450
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_025550__    401 FIDGKPNKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLI    450

BSNT_04156___    451 IIDGGKGQINAARDVIENELGLDIPIAGLAKDEKHRTSNLLIGDPLEVVY    500
                     |||||||||||||||:|||||||:|:||||||:||||||||||||||.|:
RBAM_025550__    451 IIDGGKGQINAARDVLENELGLDVPVAGLAKDDKHRTSNLLIGDPLEPVF    500

BSNT_04156___    501 LERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRK    550
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_025550__    501 LERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSVFQSVLDDIPGIGEKRK    550

BSNT_04156___    551 KMLLKHFGSVKKMKEASLEDIKKAGVPAAAAQLLYDKLQK    590
                     ||||||||||||||||||:|||||||||||||||::||:|
RBAM_025550__    551 KMLLKHFGSVKKMKEASLDDIKKAGVPAAAAQLLFEKLKK    590


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