Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04146 and RBAM_025490

See DNA alignment / Visit BSNT_04146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04146___ysmA.1.9828.seq
#    -bsequence pep-align/RBAM_025490___ysmA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04146___ysmA-RBAM_025490___ysmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04146___ysmA-RBAM_025490___ysmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04146___ysmA
# 2: RBAM_025490___ysmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     110/147 (74.8%)
# Similarity:   126/147 (85.7%)
# Gaps:           2/147 ( 1.4%)
# Score: 596.0
# 
#
#=======================================

BSNT_04146___      1 MKLPAYIDMPFQEWKTSFSFFNEVSVRFSETDMFGHMNNVTPFIYFEEAR     50
                     ||.|.|||:||:||:.|||||.||||||||||||||||||||||||||||
RBAM_025490__      1 MKQPQYIDIPFEEWRQSFSFFTEVSVRFSETDMFGHMNNVTPFIYFEEAR     50

BSNT_04146___     51 ISYFKKLNMMSENKQTMTVVASQQCDYLRQVMPYEELRIYVKTSTVGSSS    100
                     |:|||:..:.::|.:||||||||||||:|||||||.||||||.|..|::|
RBAM_025490__     51 IAYFKQRGITAQNSETMTVVASQQCDYMRQVMPYENLRIYVKASAAGNAS    100

BSNT_04146___    101 LTLHYLGENREGEPCFTGAVVMVQVSKESGKAVSWTDEEKETLLHTR    147
                     :||||||||..|.|||||:||||||||:||||||||:.||..||.  
RBAM_025490__    101 VTLHYLGENESGLPCFTGSVVMVQVSKKSGKAVSWTEREKGILLA--    145


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