Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04143 and RBAM_025470

See DNA alignment / Visit BSNT_04143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04143___ysmB.1.9828.seq
#    -bsequence pep-align/RBAM_025470___ysmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04143___ysmB-RBAM_025470___ysmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04143___ysmB-RBAM_025470___ysmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04143___ysmB
# 2: RBAM_025470___ysmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     132/146 (90.4%)
# Similarity:   139/146 (95.2%)
# Gaps:           0/146 ( 0.0%)
# Score: 673.0
# 
#
#=======================================

BSNT_04143___      1 MTSKPLEHVADIEKSLRHIAAIIKQKGREILNQYAITPPQFVGLQWLYEL     50
                     ||||.:||||||||||||||||||||||||||||||||||||||||||||
RBAM_025470__      1 MTSKSVEHVADIEKSLRHIAAIIKQKGREILNQYAITPPQFVGLQWLYEL     50

BSNT_04143___     51 GDMTIGELSGKMYLACSTTTDLIDRMQKNELVERVKDPADRRVVRIHLLP    100
                     ||||||||||||||||||||||||||:||:|||||||||||||||||||.
RBAM_025470__     51 GDMTIGELSGKMYLACSTTTDLIDRMEKNKLVERVKDPADRRVVRIHLLA    100

BSNT_04143___    101 EGERIIQEVITKRQEYLRDMFESFTDEEIAIFEKSLMKLQHEMKRK    146
                     ||||||||||.|||.||||||.:|::||.|.|||||:|||||||||
RBAM_025470__    101 EGERIIQEVILKRQAYLRDMFATFSEEETAAFEKSLLKLQHEMKRK    146


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