Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04143 and RBAM_025470

See Amino acid alignment / Visit BSNT_04143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_04143___ysmB.1.9828.seq
#    -bsequence dna-align/RBAM_025470___ysmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04143___ysmB-RBAM_025470___ysmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04143___ysmB-RBAM_025470___ysmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04143___ysmB
# 2: RBAM_025470___ysmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     375/444 (84.5%)
# Similarity:   375/444 (84.5%)
# Gaps:           6/444 ( 1.4%)
# Score: 1582.0
# 
#
#=======================================

BSNT_04143___      1 ATGACATCAAAACCTTTGGAGCATGTTGCGGATATTGAAAAGTCACTCCG     50
                     ||||||||||||.||.|.|||||||||||||||||.|||||.||||||||
RBAM_025470__      1 ATGACATCAAAATCTGTAGAGCATGTTGCGGATATCGAAAAATCACTCCG     50

BSNT_04143___     51 CCACATTGCCGCGATCATTAAGCAAAAAGGACGAGAAATCCTTAACCAAT    100
                     |||.||.||.|||||||||||.|||||||||.||||||||||||||||||
RBAM_025470__     51 CCATATCGCTGCGATCATTAAACAAAAAGGAAGAGAAATCCTTAACCAAT    100

BSNT_04143___    101 ATGCGATTACGCCGCCGCAATTTGT-CGGCTTGCAATGGCTTTATGAATT    149
                     ||||.|||||.|||||||||||.|| .||||| |||||||||||||||||
RBAM_025470__    101 ATGCAATTACACCGCCGCAATTCGTGGGGCTT-CAATGGCTTTATGAATT    149

BSNT_04143___    150 AGGAGATATGACAATCGGTGAATTATCGGGCAAAATGTATCTGGCATGCA    199
                     .||.|||||||||||.||.||||||||.||||||||||||.||||.||||
RBAM_025470__    150 GGGGGATATGACAATAGGCGAATTATCAGGCAAAATGTATTTGGCTTGCA    199

BSNT_04143___    200 GCACGACAACGGACTTAATCGACCGCATGCAAAAAAATGAGCTTGTGGAG    249
                     |||||||.|||||..|.||.|||||||||.||||||||.|||||||.|||
RBAM_025470__    200 GCACGACGACGGATCTGATAGACCGCATGGAAAAAAATAAGCTTGTCGAG    249

BSNT_04143___    250 CGGGTCAAGGACCCGGCGGACAGACGTGTTGTCCGGATACATCTGCTGCC    299
                     |||||.||.||||||||.||||||||.||.|||.|.||.|||||.||..|
RBAM_025470__    250 CGGGTGAAAGACCCGGCTGACAGACGGGTCGTCAGAATTCATCTTCTCGC    299

BSNT_04143___    300 TGAAGGAGAACGGATTATCCAAGAGGTCATTACAAAAAGACAGGAATATC    349
                     |||||||||.||.|||||||||||.||.|||...||||||||||..|||.
RBAM_025470__    300 TGAAGGAGAGCGCATTATCCAAGAAGTGATTTTGAAAAGACAGGCTTATT    349

BSNT_04143___    350 TGCGTGATATGTT--CGAATCGTTTACAGATGAAGAAATAGCCATCTTCG    397
                     ||||.||||||||  |||  |.|||.|.||.|||||||.||||...||||
RBAM_025470__    350 TGCGGGATATGTTTGCGA--CATTTTCCGAAGAAGAAACAGCCGCTTTCG    397

BSNT_04143___    398 AAAAATCTTTGATGAAACTGCAGCATGAAATGAAGAGAAAATGA    441
                     |||||||.||..||||||||||||||||||||||.|||||||||
RBAM_025470__    398 AAAAATCATTATTGAAACTGCAGCATGAAATGAAAAGAAAATGA    441


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