Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04142 and RBAM_025460

See DNA alignment / Visit BSNT_04142 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04142___racE.1.9828.seq
#    -bsequence pep-align/RBAM_025460___racE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04142___racE-RBAM_025460___racE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04142___racE-RBAM_025460___racE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04142___racE
# 2: RBAM_025460___racE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     228/272 (83.8%)
# Similarity:   249/272 (91.5%)
# Gaps:           1/272 ( 0.4%)
# Score: 1202.0
# 
#
#=======================================

BSNT_04142___      1 -MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEV     49
                      :||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025460__      1 MLEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEV     50

BSNT_04142___     50 LQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPG     99
                     ||||||:|:|||||||||||||||||||||||:||||...||||||||||
RBAM_025460__     51 LQYTWEMTDYLLENHHIKMLVIACNTATAIALEDIQRKTDIPVVGVIQPG    100

BSNT_04142___    100 ARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVP    149
                     ||.|||||.|||||||||.|||||.|||:|||.||.:|:|||.|||||||
RBAM_025460__    101 ARTAIKVTKNQHIGVIGTVNTIKSRAYEQALLGLNAELQVENTACPLLVP    150

BSNT_04142___    150 FVESGKFLDKTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMG    199
                     |||||:||.::|:|.|:.||.|||.||||:||||||||||||:.||.|||
RBAM_025460__    151 FVESGRFLQESAEEAVEASLEPLKGTSIDTLILGCTHYPILKDPIQNYMG    200

BSNT_04142___    200 EHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIA    249
                     |||.|||||||||||||||||||||||||..||:|||||||.|:.|||||
RBAM_025460__    201 EHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGERNGFAKIA    250

BSNT_04142___    250 DDWFGHEVGHVECISLQEPIKR    271
                     :||||||:|||||||||||:::
RBAM_025460__    251 EDWFGHEIGHVECISLQEPVRK    272


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