Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04140 and RBAM_025440

See DNA alignment / Visit BSNT_04140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence pep-align/BSNT_04140___rph.1.9828.seq
#    -bsequence pep-align/RBAM_025440___rph.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04140___rph-RBAM_025440___rph.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04140___rph-RBAM_025440___rph.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04140___rph
# 2: RBAM_025440___rph
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     228/245 (93.1%)
# Similarity:   241/245 (98.4%)
# Gaps:           0/245 ( 0.0%)
# Score: 1181.0
# 
#
#=======================================

BSNT_04140___      1 MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPF     50
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_025440__      1 MRHDGRQHDELRPITFDLDFITHPEGSVLITAGNTKVICNASVEDRVPPF     50

BSNT_04140___     51 LRGGGKGWITAEYSMLPRATNQRTIRESSKGKISGRTMEIQRLIGRALRA    100
                     ||||||||||||||||||||||||||||||||:|||||||||||||||||
RBAM_025440__     51 LRGGGKGWITAEYSMLPRATNQRTIRESSKGKVSGRTMEIQRLIGRALRA    100

BSNT_04140___    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLIKAGTI    150
                     ||||||||||||||||||||||||||||||||||||||||||||:|:|.|
RBAM_025440__    101 VVDLEKLGERTIWIDCDVIQADGGTRTASITGAFLAMAIAIGKLVKSGVI    150

BSNT_04140___    151 KTSPITDFLAAISVGIDKEQGILLDLNYEEDSSAEVDMNVIMTGSGRFVE    200
                     ||||:||:|||||||:|||:|:||||||||||:||||||:||||||||||
RBAM_025440__    151 KTSPVTDYLAAISVGMDKEEGLLLDLNYEEDSAAEVDMNIIMTGSGRFVE    200

BSNT_04140___    201 LQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEVLGDSLPELK    245
                     |||||||||||||||||||.|||||||.||.|||||||::|||||
RBAM_025440__    201 LQGTGEEATFSREDLNGLLSLAEKGIQTLIQKQKEVLGETLPELK    245


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