Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04140 and RBAM_025440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence dna-align/BSNT_04140___rph.1.9828.seq
# -bsequence dna-align/RBAM_025440___rph.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04140___rph-RBAM_025440___rph.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04140___rph-RBAM_025440___rph.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04140___rph
# 2: RBAM_025440___rph
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 588/741 (79.4%)
# Similarity: 588/741 (79.4%)
# Gaps: 6/741 ( 0.8%)
# Score: 2292.0
#
#
#=======================================
BSNT_04140___ 1 ATGAGACATGACGGAAGACAACACGATGAGCTGCGTCCAATCACATTCGA 50
||||||||.|||||||||||.||||||||||||||.||.||||||||.||
RBAM_025440__ 1 ATGAGACACGACGGAAGACAGCACGATGAGCTGCGCCCTATCACATTTGA 50
BSNT_04140___ 51 TTTGGATTTTATCAGCCATCCGGAAGGTTCTGTTCTAATAACAGCAGGGA 100
||||||||||||||..||.||||||||.||||||.||||.|||||.||.|
RBAM_025440__ 51 TTTGGATTTTATCACTCACCCGGAAGGCTCTGTTTTAATTACAGCGGGAA 100
BSNT_04140___ 101 ATACAAAGGTAATCTGCAACGCGTCTGTTGAGGATCGCGTACCGCCGTTT 150
||||.|||||.|||||.||.||.|||||.||.||.||.||.|||||.|||
RBAM_025440__ 101 ATACGAAGGTCATCTGTAATGCATCTGTGGAAGACCGGGTGCCGCCATTT 150
BSNT_04140___ 151 TTGCGGGGCGGAGGGAAAGGCTGGATTACAGCAGAGTACAGCATGCTGCC 200
||.||.||||||||.|||||||||||.|||||.||.|||||||||||.||
RBAM_025440__ 151 TTACGCGGCGGAGGAAAAGGCTGGATCACAGCGGAATACAGCATGCTTCC 200
BSNT_04140___ 201 GCGGGCAACAAACCAAAGAACAATCAGAGAATCTTCTAAGGGGAAAATTT 250
.||.||.||.||.||||||||.||.|||||||||||.||.||.||..|.|
RBAM_025440__ 201 CCGCGCGACGAATCAAAGAACGATAAGAGAATCTTCAAAAGGAAAGGTCT 250
BSNT_04140___ 251 CCGGCAGAACAATGGAGATCCAACGCCTGATCGGCCGCGCGCTTCGAGCT 300
||||||||||.|||||.||.||.||.||||||||.||||||||.||.||.
RBAM_025440__ 251 CCGGCAGAACGATGGAAATTCAGCGGCTGATCGGGCGCGCGCTCCGGGCC 300
BSNT_04140___ 301 GTTGTAGATCTGGAAAAGCTCGGTGAACGGACGATTTGGATTGACTGTGA 350
||.||.|||.||||.||||||||.|||||||||||.|||||.||||||||
RBAM_025440__ 301 GTCGTTGATTTGGAGAAGCTCGGCGAACGGACGATCTGGATCGACTGTGA 350
BSNT_04140___ 351 TGTCATTCAAGCTGATGGAGGAACTAGAACAGCTTCCATTACAGGCGCAT 400
.||||||||||||||.||.|||||.|||||.|||||||||||.||||| .
RBAM_025440__ 351 CGTCATTCAAGCTGACGGCGGAACAAGAACGGCTTCCATTACCGGCGC-C 399
BSNT_04140___ 401 TTCTT-GCTATGGCGATTGCGATTGGCAAGCT-GATCAAAGCAGGAACAA 448
||||| ||.|||||.||||||||.|||||.|| |...||||| ||....|
RBAM_025440__ 400 TTCTTGGCAATGGCCATTGCGATCGGCAAACTCGTAAAAAGC-GGCGTTA 448
BSNT_04140___ 449 TCAAGACAAGTCCGATCACTGATTTTCTTGCTGCGATCTCTGTTGGAATT 498
||||.|||..|||..|.||.||||.|||.||.||.||.|||||.||.||.
RBAM_025440__ 449 TCAAAACATCTCCTGTGACAGATTATCTCGCGGCCATTTCTGTCGGGATG 498
BSNT_04140___ 499 GATAAGGAACAGGGAATTTTGTTAGATTTAAATTATGAAGAAGATTCCTC 548
|||||.|||.|.||..||.|.||.|||.|.|||||||||||.|||||..|
RBAM_025440__ 499 GATAAAGAAGAAGGCCTTCTTTTGGATCTGAATTATGAAGAGGATTCGGC 548
BSNT_04140___ 549 CGCTGAAGTTGACATGAATGTCATCATGACAGGCAGCGGCCGTTTTGTGG 598
.||||||||.|||||||||.|.||||||||.||.|||||.||||||||.|
RBAM_025440__ 549 GGCTGAAGTCGACATGAATATTATCATGACGGGAAGCGGACGTTTTGTAG 598
BSNT_04140___ 599 AACTGCAGGGAACCGGGGAAGAGGCGACTTTTTCAAGAGAGGATCTGAAC 648
|.||.||.||.||.||.|||||.||.||.||.||..|.||.|||.|.|||
RBAM_025440__ 599 AGCTTCAAGGGACGGGCGAAGAAGCCACATTCTCCCGTGAAGATTTAAAC 648
BSNT_04140___ 649 GGTCTTCTGGGTCTTGCGGAAAAAGGAATTCAAGA-GCTGATTGACAAGC 697
||.||..|..|.|||||.|||||||||| ||.||| |||.|||.|.||||
RBAM_025440__ 649 GGACTGTTAAGCCTTGCCGAAAAAGGAA-TCCAGACGCTTATTCAAAAGC 697
BSNT_04140___ 698 AAAAAGAAGTGCTGGGTGATTCTCTGCCAGAACTGAAATAA 738
||||||||||||||||.||..|..||||.||||||||||||
RBAM_025440__ 698 AAAAAGAAGTGCTGGGAGAAACATTGCCTGAACTGAAATAA 738
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